Protein–RNA interactions for Protein: Q80TT8

Cul9, Cullin-9, mousemouse

Predictions only

Length 1,865 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul9Q80TT8 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Cul9Q80TT8 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cul9Q80TT8 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cul9Q80TT8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC22.19■■□□□ 1.14
Cul9Q80TT8 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cul9Q80TT8 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cul9Q80TT8 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Cul9Q80TT8 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Cul9Q80TT8 AC153962.4-201ENSMUST00000217878 242 ntBASIC22.19■■□□□ 1.14
Cul9Q80TT8 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cul9Q80TT8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Cul9Q80TT8 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cul9Q80TT8 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cul9Q80TT8 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cul9Q80TT8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Cul9Q80TT8 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cul9Q80TT8 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cul9Q80TT8 Ldb3-207ENSMUST00000227819 1499 ntBASIC22.18■■□□□ 1.14
Cul9Q80TT8 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Cul9Q80TT8 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC22.18■■□□□ 1.14
Cul9Q80TT8 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC22.18■■□□□ 1.14
Cul9Q80TT8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cul9Q80TT8 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cul9Q80TT8 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC22.18■■□□□ 1.14
Cul9Q80TT8 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cul9Q80TT8 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Cul9Q80TT8 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cul9Q80TT8 Gm27838-201ENSMUST00000184829 128 ntBASIC22.17■■□□□ 1.14
Cul9Q80TT8 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cul9Q80TT8 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Cul9Q80TT8 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cul9Q80TT8 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cul9Q80TT8 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cul9Q80TT8 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC22.17■■□□□ 1.14
Cul9Q80TT8 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC22.17■■□□□ 1.14
Cul9Q80TT8 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC22.17■■□□□ 1.14
Cul9Q80TT8 Gm18062-201ENSMUST00000208020 547 ntBASIC22.17■■□□□ 1.14
Cul9Q80TT8 Gm18055-201ENSMUST00000208254 547 ntBASIC22.17■■□□□ 1.14
Cul9Q80TT8 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cul9Q80TT8 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cul9Q80TT8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Cul9Q80TT8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
Cul9Q80TT8 Gm45774-201ENSMUST00000211992 2665 ntBASIC22.17■■□□□ 1.14
Cul9Q80TT8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cul9Q80TT8 Gm13233-201ENSMUST00000118760 1443 ntBASIC22.16■■□□□ 1.14
Cul9Q80TT8 Gm13244-201ENSMUST00000118855 1446 ntBASIC22.16■■□□□ 1.14
Cul9Q80TT8 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC22.16■■□□□ 1.14
Cul9Q80TT8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cul9Q80TT8 Gm5303-201ENSMUST00000117943 1252 ntBASIC22.16■■□□□ 1.14
Cul9Q80TT8 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC22.16■■□□□ 1.14
Cul9Q80TT8 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC22.16■■□□□ 1.14
Cul9Q80TT8 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cul9Q80TT8 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC22.15■■□□□ 1.14
Cul9Q80TT8 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cul9Q80TT8 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Cul9Q80TT8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cul9Q80TT8 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cul9Q80TT8 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cul9Q80TT8 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC22.15■■□□□ 1.14
Cul9Q80TT8 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Cul9Q80TT8 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Cul9Q80TT8 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cul9Q80TT8 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cul9Q80TT8 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC22.15■■□□□ 1.14
Cul9Q80TT8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cul9Q80TT8 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Cul9Q80TT8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Cul9Q80TT8 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
Cul9Q80TT8 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Cul9Q80TT8 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC22.14■■□□□ 1.14
Cul9Q80TT8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Cul9Q80TT8 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Cul9Q80TT8 Gm38327-201ENSMUST00000195852 1755 ntBASIC22.14■■□□□ 1.14
Cul9Q80TT8 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cul9Q80TT8 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cul9Q80TT8 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC22.14■■□□□ 1.13
Cul9Q80TT8 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cul9Q80TT8 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
Cul9Q80TT8 Gm6745-201ENSMUST00000199216 526 ntBASIC22.14■■□□□ 1.13
Cul9Q80TT8 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC22.14■■□□□ 1.13
Cul9Q80TT8 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC22.14■■□□□ 1.13
Cul9Q80TT8 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Cul9Q80TT8 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cul9Q80TT8 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cul9Q80TT8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cul9Q80TT8 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cul9Q80TT8 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cul9Q80TT8 AC131743.5-201ENSMUST00000220775 1618 ntBASIC22.14■■□□□ 1.13
Cul9Q80TT8 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cul9Q80TT8 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cul9Q80TT8 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Cul9Q80TT8 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC22.13■■□□□ 1.13
Cul9Q80TT8 Gm18624-201ENSMUST00000220966 658 ntBASIC22.13■■□□□ 1.13
Cul9Q80TT8 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cul9Q80TT8 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cul9Q80TT8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cul9Q80TT8 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cul9Q80TT8 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Cul9Q80TT8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC22.13■■□□□ 1.13
Cul9Q80TT8 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms