Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf38bQ80SY5 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf38bQ80SY5 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Prpf38bQ80SY5 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf38bQ80SY5 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Prpf38bQ80SY5 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.37■□□□□ 0.21
Prpf38bQ80SY5 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf38bQ80SY5 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Prpf38bQ80SY5 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf38bQ80SY5 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf38bQ80SY5 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Prpf38bQ80SY5 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Prpf38bQ80SY5 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf38bQ80SY5 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf38bQ80SY5 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Prpf38bQ80SY5 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Prpf38bQ80SY5 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf38bQ80SY5 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf38bQ80SY5 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.36■□□□□ 0.21
Prpf38bQ80SY5 Gm7222-201ENSMUST00000117512 906 ntBASIC16.36■□□□□ 0.21
Prpf38bQ80SY5 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.36■□□□□ 0.21
Prpf38bQ80SY5 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Prpf38bQ80SY5 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf38bQ80SY5 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.36■□□□□ 0.21
Prpf38bQ80SY5 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf38bQ80SY5 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf38bQ80SY5 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf38bQ80SY5 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf38bQ80SY5 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf38bQ80SY5 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf38bQ80SY5 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf38bQ80SY5 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf38bQ80SY5 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf38bQ80SY5 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf38bQ80SY5 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
Prpf38bQ80SY5 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf38bQ80SY5 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Prpf38bQ80SY5 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Prpf38bQ80SY5 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Prpf38bQ80SY5 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Prpf38bQ80SY5 Phf7-203ENSMUST00000226565 1971 ntBASIC16.35■□□□□ 0.21
Prpf38bQ80SY5 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.35■□□□□ 0.21
Prpf38bQ80SY5 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.35■□□□□ 0.21
Prpf38bQ80SY5 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.35■□□□□ 0.21
Prpf38bQ80SY5 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Prpf38bQ80SY5 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.35■□□□□ 0.21
Prpf38bQ80SY5 Gm44430-201ENSMUST00000203376 995 ntBASIC16.35■□□□□ 0.21
Prpf38bQ80SY5 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.35■□□□□ 0.21
Prpf38bQ80SY5 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Prpf38bQ80SY5 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Prpf38bQ80SY5 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Prpf38bQ80SY5 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Prpf38bQ80SY5 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Prpf38bQ80SY5 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Prpf38bQ80SY5 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Prpf38bQ80SY5 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf38bQ80SY5 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf38bQ80SY5 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf38bQ80SY5 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf38bQ80SY5 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf38bQ80SY5 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.34■□□□□ 0.21
Prpf38bQ80SY5 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.34■□□□□ 0.21
Prpf38bQ80SY5 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Prpf38bQ80SY5 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf38bQ80SY5 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf38bQ80SY5 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf38bQ80SY5 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf38bQ80SY5 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf38bQ80SY5 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf38bQ80SY5 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf38bQ80SY5 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf38bQ80SY5 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf38bQ80SY5 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf38bQ80SY5 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf38bQ80SY5 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf38bQ80SY5 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf38bQ80SY5 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Prpf38bQ80SY5 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Prpf38bQ80SY5 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Prpf38bQ80SY5 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Prpf38bQ80SY5 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Prpf38bQ80SY5 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.33■□□□□ 0.2
Prpf38bQ80SY5 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf38bQ80SY5 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf38bQ80SY5 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Prpf38bQ80SY5 Gm25745-201ENSMUST00000174945 133 ntBASIC16.33■□□□□ 0.2
Prpf38bQ80SY5 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.33■□□□□ 0.2
Prpf38bQ80SY5 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.33■□□□□ 0.2
Prpf38bQ80SY5 Gm44450-201ENSMUST00000199528 114 ntBASIC16.33■□□□□ 0.2
Prpf38bQ80SY5 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.33■□□□□ 0.2
Prpf38bQ80SY5 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf38bQ80SY5 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.33■□□□□ 0.2
Prpf38bQ80SY5 AC154532.1-201ENSMUST00000227860 965 ntBASIC16.33■□□□□ 0.2
Prpf38bQ80SY5 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf38bQ80SY5 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf38bQ80SY5 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Prpf38bQ80SY5 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf38bQ80SY5 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf38bQ80SY5 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Prpf38bQ80SY5 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms