Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pif1Q80SX8 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pif1Q80SX8 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Pif1Q80SX8 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.44□□□□□ -0.1
Pif1Q80SX8 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Pif1Q80SX8 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Pif1Q80SX8 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pif1Q80SX8 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pif1Q80SX8 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pif1Q80SX8 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pif1Q80SX8 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.43□□□□□ -0.1
Pif1Q80SX8 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pif1Q80SX8 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pif1Q80SX8 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pif1Q80SX8 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pif1Q80SX8 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pif1Q80SX8 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pif1Q80SX8 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
Pif1Q80SX8 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pif1Q80SX8 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pif1Q80SX8 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Pif1Q80SX8 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pif1Q80SX8 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pif1Q80SX8 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.43□□□□□ -0.1
Pif1Q80SX8 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.43□□□□□ -0.1
Pif1Q80SX8 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.43□□□□□ -0.1
Pif1Q80SX8 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Pif1Q80SX8 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pif1Q80SX8 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.43□□□□□ -0.1
Pif1Q80SX8 Gm45167-201ENSMUST00000208007 322 ntBASIC14.43□□□□□ -0.1
Pif1Q80SX8 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.43□□□□□ -0.1
Pif1Q80SX8 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pif1Q80SX8 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pif1Q80SX8 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pif1Q80SX8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pif1Q80SX8 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Pif1Q80SX8 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pif1Q80SX8 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pif1Q80SX8 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pif1Q80SX8 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pif1Q80SX8 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pif1Q80SX8 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pif1Q80SX8 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pif1Q80SX8 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pif1Q80SX8 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pif1Q80SX8 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pif1Q80SX8 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pif1Q80SX8 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pif1Q80SX8 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pif1Q80SX8 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Pif1Q80SX8 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Pif1Q80SX8 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pif1Q80SX8 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pif1Q80SX8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pif1Q80SX8 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pif1Q80SX8 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pif1Q80SX8 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.42□□□□□ -0.1
Pif1Q80SX8 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pif1Q80SX8 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.42□□□□□ -0.1
Pif1Q80SX8 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Pif1Q80SX8 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Pif1Q80SX8 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pif1Q80SX8 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pif1Q80SX8 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
Pif1Q80SX8 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.42□□□□□ -0.1
Pif1Q80SX8 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pif1Q80SX8 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pif1Q80SX8 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pif1Q80SX8 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Pif1Q80SX8 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pif1Q80SX8 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Pif1Q80SX8 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pif1Q80SX8 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pif1Q80SX8 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Pif1Q80SX8 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Pif1Q80SX8 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pif1Q80SX8 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pif1Q80SX8 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Pif1Q80SX8 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pif1Q80SX8 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pif1Q80SX8 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.41□□□□□ -0.1
Pif1Q80SX8 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pif1Q80SX8 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Pif1Q80SX8 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.41□□□□□ -0.1
Pif1Q80SX8 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.41□□□□□ -0.1
Pif1Q80SX8 Gm8344-201ENSMUST00000119813 856 ntBASIC14.41□□□□□ -0.1
Pif1Q80SX8 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.41□□□□□ -0.1
Pif1Q80SX8 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Pif1Q80SX8 Gm37153-201ENSMUST00000193637 231 ntBASIC14.41□□□□□ -0.1
Pif1Q80SX8 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pif1Q80SX8 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pif1Q80SX8 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pif1Q80SX8 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Pif1Q80SX8 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Pif1Q80SX8 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pif1Q80SX8 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pif1Q80SX8 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pif1Q80SX8 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pif1Q80SX8 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pif1Q80SX8 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms