Protein–RNA interactions for Protein: Q78RX3

Smim12, Small integral membrane protein 12, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim12Q78RX3 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smim12Q78RX3 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim12Q78RX3 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Smim12Q78RX3 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim12Q78RX3 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim12Q78RX3 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim12Q78RX3 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.2□□□□□ -0.3
Smim12Q78RX3 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC13.2□□□□□ -0.3
Smim12Q78RX3 AL672049.1-201ENSMUST00000197943 91 ntBASIC13.2□□□□□ -0.3
Smim12Q78RX3 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC13.2□□□□□ -0.3
Smim12Q78RX3 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.2□□□□□ -0.3
Smim12Q78RX3 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim12Q78RX3 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Smim12Q78RX3 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim12Q78RX3 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim12Q78RX3 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.2□□□□□ -0.3
Smim12Q78RX3 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.2□□□□□ -0.3
Smim12Q78RX3 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim12Q78RX3 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim12Q78RX3 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim12Q78RX3 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim12Q78RX3 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim12Q78RX3 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smim12Q78RX3 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim12Q78RX3 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim12Q78RX3 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.19□□□□□ -0.3
Smim12Q78RX3 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim12Q78RX3 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim12Q78RX3 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim12Q78RX3 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim12Q78RX3 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim12Q78RX3 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim12Q78RX3 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim12Q78RX3 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim12Q78RX3 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim12Q78RX3 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Smim12Q78RX3 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.19□□□□□ -0.3
Smim12Q78RX3 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Smim12Q78RX3 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.19□□□□□ -0.3
Smim12Q78RX3 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Smim12Q78RX3 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.19□□□□□ -0.3
Smim12Q78RX3 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Smim12Q78RX3 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim12Q78RX3 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim12Q78RX3 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim12Q78RX3 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smim12Q78RX3 Zkscan4-202ENSMUST00000225845 1506 ntBASIC13.18□□□□□ -0.3
Smim12Q78RX3 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smim12Q78RX3 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smim12Q78RX3 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Smim12Q78RX3 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smim12Q78RX3 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smim12Q78RX3 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smim12Q78RX3 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.18□□□□□ -0.3
Smim12Q78RX3 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smim12Q78RX3 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smim12Q78RX3 Gm43799-201ENSMUST00000201845 579 ntBASIC13.18□□□□□ -0.3
Smim12Q78RX3 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smim12Q78RX3 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Smim12Q78RX3 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smim12Q78RX3 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smim12Q78RX3 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smim12Q78RX3 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smim12Q78RX3 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smim12Q78RX3 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smim12Q78RX3 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smim12Q78RX3 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Smim12Q78RX3 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smim12Q78RX3 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smim12Q78RX3 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smim12Q78RX3 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.18□□□□□ -0.3
Smim12Q78RX3 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smim12Q78RX3 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.18□□□□□ -0.3
Smim12Q78RX3 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.18□□□□□ -0.3
Smim12Q78RX3 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smim12Q78RX3 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smim12Q78RX3 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smim12Q78RX3 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smim12Q78RX3 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Smim12Q78RX3 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Smim12Q78RX3 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smim12Q78RX3 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.17□□□□□ -0.3
Smim12Q78RX3 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smim12Q78RX3 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smim12Q78RX3 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smim12Q78RX3 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13.17□□□□□ -0.3
Smim12Q78RX3 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.17□□□□□ -0.3
Smim12Q78RX3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smim12Q78RX3 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Smim12Q78RX3 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Smim12Q78RX3 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smim12Q78RX3 BC037039-201ENSMUST00000192003 2205 ntBASIC13.17□□□□□ -0.3
Smim12Q78RX3 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smim12Q78RX3 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smim12Q78RX3 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smim12Q78RX3 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smim12Q78RX3 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.17□□□□□ -0.3
Smim12Q78RX3 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smim12Q78RX3 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smim12Q78RX3 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms