Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm23147-201ENSMUST00000178841 110 ntBASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Gm26095-201ENSMUST00000179270 110 ntBASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Gm22171-201ENSMUST00000179283 110 ntBASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Gm23936-201ENSMUST00000179354 110 ntBASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Gm22619-201ENSMUST00000179516 110 ntBASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Gm25255-201ENSMUST00000179579 110 ntBASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Gm24755-201ENSMUST00000179691 110 ntBASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Gm26506-201ENSMUST00000179692 110 ntBASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Gm25086-201ENSMUST00000179931 110 ntBASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Gm23243-201ENSMUST00000180047 110 ntBASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Gm24659-201ENSMUST00000180212 110 ntBASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Gm24169-201ENSMUST00000180244 110 ntBASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Gm23689-201ENSMUST00000180354 110 ntBASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Gm27359-201ENSMUST00000184153 110 ntBASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Gm27785-201ENSMUST00000184268 110 ntBASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Gm27466-201ENSMUST00000184396 110 ntBASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Gm27703-201ENSMUST00000184836 110 ntBASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Gm6018-201ENSMUST00000216090 1306 ntBASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Gm15920-201ENSMUST00000118998 402 ntBASIC18.3■□□□□ 0.52
Nup98Q6PFD9 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nup98Q6PFD9 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nup98Q6PFD9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nup98Q6PFD9 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nup98Q6PFD9 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC18.29■□□□□ 0.52
Nup98Q6PFD9 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nup98Q6PFD9 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nup98Q6PFD9 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nup98Q6PFD9 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nup98Q6PFD9 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nup98Q6PFD9 AC154767.3-201ENSMUST00000225150 1342 ntBASIC18.29■□□□□ 0.52
Nup98Q6PFD9 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nup98Q6PFD9 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nup98Q6PFD9 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nup98Q6PFD9 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Nup98Q6PFD9 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC18.29■□□□□ 0.52
Nup98Q6PFD9 Gm44872-201ENSMUST00000207864 420 ntBASIC18.29■□□□□ 0.52
Nup98Q6PFD9 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC18.29■□□□□ 0.52
Nup98Q6PFD9 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC18.29■□□□□ 0.52
Nup98Q6PFD9 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.29■□□□□ 0.52
Nup98Q6PFD9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nup98Q6PFD9 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nup98Q6PFD9 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Nup98Q6PFD9 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nup98Q6PFD9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nup98Q6PFD9 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nup98Q6PFD9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nup98Q6PFD9 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nup98Q6PFD9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nup98Q6PFD9 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nup98Q6PFD9 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nup98Q6PFD9 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC18.28■□□□□ 0.52
Nup98Q6PFD9 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC18.28■□□□□ 0.52
Nup98Q6PFD9 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC18.28■□□□□ 0.52
Nup98Q6PFD9 Gm7556-201ENSMUST00000201178 1084 ntBASIC18.28■□□□□ 0.52
Nup98Q6PFD9 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nup98Q6PFD9 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nup98Q6PFD9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nup98Q6PFD9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nup98Q6PFD9 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nup98Q6PFD9 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nup98Q6PFD9 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nup98Q6PFD9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nup98Q6PFD9 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nup98Q6PFD9 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC18.28■□□□□ 0.52
Nup98Q6PFD9 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nup98Q6PFD9 Gm6973-201ENSMUST00000117080 721 ntBASIC18.28■□□□□ 0.52
Nup98Q6PFD9 Gm18889-201ENSMUST00000174284 929 ntBASIC18.28■□□□□ 0.52
Nup98Q6PFD9 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC18.28■□□□□ 0.52
Nup98Q6PFD9 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nup98Q6PFD9 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nup98Q6PFD9 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nup98Q6PFD9 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nup98Q6PFD9 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nup98Q6PFD9 Gm13410-201ENSMUST00000117058 1415 ntBASIC18.27■□□□□ 0.52
Nup98Q6PFD9 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nup98Q6PFD9 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nup98Q6PFD9 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC18.27■□□□□ 0.52
Nup98Q6PFD9 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC18.27■□□□□ 0.52
Nup98Q6PFD9 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC18.27■□□□□ 0.52
Nup98Q6PFD9 AC131710.1-201ENSMUST00000228336 990 ntBASIC18.27■□□□□ 0.52
Nup98Q6PFD9 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nup98Q6PFD9 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Nup98Q6PFD9 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Nup98Q6PFD9 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Nup98Q6PFD9 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nup98Q6PFD9 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC18.26■□□□□ 0.51
Nup98Q6PFD9 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms