Protein–RNA interactions for Protein: Q6PE13

Prrt3, Proline-rich transmembrane protein 3, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt3Q6PE13 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Prrt3Q6PE13 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Prrt3Q6PE13 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prrt3Q6PE13 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.44■□□□□ 0.22
Prrt3Q6PE13 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Prrt3Q6PE13 Gm36991-201ENSMUST00000191800 648 ntBASIC16.44■□□□□ 0.22
Prrt3Q6PE13 Gm37153-201ENSMUST00000193637 231 ntBASIC16.44■□□□□ 0.22
Prrt3Q6PE13 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Prrt3Q6PE13 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.44■□□□□ 0.22
Prrt3Q6PE13 Gm18363-201ENSMUST00000221671 730 ntBASIC16.44■□□□□ 0.22
Prrt3Q6PE13 AC125117.2-201ENSMUST00000228344 1140 ntBASIC16.44■□□□□ 0.22
Prrt3Q6PE13 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prrt3Q6PE13 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prrt3Q6PE13 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prrt3Q6PE13 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prrt3Q6PE13 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.44■□□□□ 0.22
Prrt3Q6PE13 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prrt3Q6PE13 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prrt3Q6PE13 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Prrt3Q6PE13 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prrt3Q6PE13 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prrt3Q6PE13 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prrt3Q6PE13 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prrt3Q6PE13 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prrt3Q6PE13 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Prrt3Q6PE13 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prrt3Q6PE13 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Prrt3Q6PE13 Gm15358-201ENSMUST00000119249 520 ntBASIC16.43■□□□□ 0.22
Prrt3Q6PE13 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.43■□□□□ 0.22
Prrt3Q6PE13 Gm6736-201ENSMUST00000166583 948 ntBASIC16.43■□□□□ 0.22
Prrt3Q6PE13 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Prrt3Q6PE13 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.43■□□□□ 0.22
Prrt3Q6PE13 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.43■□□□□ 0.22
Prrt3Q6PE13 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.43■□□□□ 0.22
Prrt3Q6PE13 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Prrt3Q6PE13 AC124408.1-201ENSMUST00000228938 707 ntBASIC16.43■□□□□ 0.22
Prrt3Q6PE13 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prrt3Q6PE13 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prrt3Q6PE13 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prrt3Q6PE13 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.43■□□□□ 0.22
Prrt3Q6PE13 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Prrt3Q6PE13 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prrt3Q6PE13 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prrt3Q6PE13 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prrt3Q6PE13 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.43■□□□□ 0.22
Prrt3Q6PE13 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prrt3Q6PE13 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Prrt3Q6PE13 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Prrt3Q6PE13 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prrt3Q6PE13 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prrt3Q6PE13 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Prrt3Q6PE13 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prrt3Q6PE13 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prrt3Q6PE13 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prrt3Q6PE13 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Prrt3Q6PE13 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prrt3Q6PE13 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prrt3Q6PE13 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.42■□□□□ 0.22
Prrt3Q6PE13 Gm6257-201ENSMUST00000163864 910 ntBASIC16.42■□□□□ 0.22
Prrt3Q6PE13 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prrt3Q6PE13 Gm27300-201ENSMUST00000184085 97 ntBASIC16.42■□□□□ 0.22
Prrt3Q6PE13 Gm27335-201ENSMUST00000184758 97 ntBASIC16.42■□□□□ 0.22
Prrt3Q6PE13 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.42■□□□□ 0.22
Prrt3Q6PE13 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.42■□□□□ 0.22
Prrt3Q6PE13 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.42■□□□□ 0.22
Prrt3Q6PE13 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prrt3Q6PE13 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prrt3Q6PE13 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prrt3Q6PE13 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prrt3Q6PE13 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prrt3Q6PE13 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Prrt3Q6PE13 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Prrt3Q6PE13 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.42■□□□□ 0.22
Prrt3Q6PE13 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prrt3Q6PE13 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prrt3Q6PE13 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Prrt3Q6PE13 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prrt3Q6PE13 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prrt3Q6PE13 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prrt3Q6PE13 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.41■□□□□ 0.22
Prrt3Q6PE13 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.41■□□□□ 0.22
Prrt3Q6PE13 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Prrt3Q6PE13 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prrt3Q6PE13 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.41■□□□□ 0.22
Prrt3Q6PE13 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prrt3Q6PE13 Gm24513-201ENSMUST00000174964 138 ntBASIC16.41■□□□□ 0.22
Prrt3Q6PE13 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.41■□□□□ 0.22
Prrt3Q6PE13 Gm45696-201ENSMUST00000212088 985 ntBASIC16.41■□□□□ 0.22
Prrt3Q6PE13 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prrt3Q6PE13 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prrt3Q6PE13 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.41■□□□□ 0.22
Prrt3Q6PE13 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.41■□□□□ 0.22
Prrt3Q6PE13 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.41■□□□□ 0.22
Prrt3Q6PE13 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC16.41■□□□□ 0.22
Prrt3Q6PE13 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prrt3Q6PE13 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prrt3Q6PE13 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prrt3Q6PE13 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prrt3Q6PE13 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prrt3Q6PE13 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms