Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Snrnp40Q6PE01 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Snrnp40Q6PE01 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Snrnp40Q6PE01 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Snrnp40Q6PE01 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Snrnp40Q6PE01 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Snrnp40Q6PE01 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Snrnp40Q6PE01 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Snrnp40Q6PE01 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Snrnp40Q6PE01 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Snrnp40Q6PE01 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Snrnp40Q6PE01 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Snrnp40Q6PE01 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Snrnp40Q6PE01 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Snrnp40Q6PE01 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.73□□□□□ -0.21
Snrnp40Q6PE01 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.73□□□□□ -0.21
Snrnp40Q6PE01 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Snrnp40Q6PE01 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Snrnp40Q6PE01 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Snrnp40Q6PE01 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Snrnp40Q6PE01 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Snrnp40Q6PE01 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Snrnp40Q6PE01 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Snrnp40Q6PE01 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.73□□□□□ -0.21
Snrnp40Q6PE01 Gm12008-201ENSMUST00000117791 755 ntBASIC13.73□□□□□ -0.21
Snrnp40Q6PE01 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.73□□□□□ -0.21
Snrnp40Q6PE01 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.73□□□□□ -0.21
Snrnp40Q6PE01 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Snrnp40Q6PE01 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.73□□□□□ -0.21
Snrnp40Q6PE01 Gm27430-201ENSMUST00000184585 107 ntBASIC13.73□□□□□ -0.21
Snrnp40Q6PE01 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.73□□□□□ -0.21
Snrnp40Q6PE01 Gm44333-201ENSMUST00000197168 107 ntBASIC13.73□□□□□ -0.21
Snrnp40Q6PE01 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.73□□□□□ -0.21
Snrnp40Q6PE01 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.73□□□□□ -0.21
Snrnp40Q6PE01 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Snrnp40Q6PE01 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.73□□□□□ -0.21
Snrnp40Q6PE01 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Snrnp40Q6PE01 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Snrnp40Q6PE01 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.73□□□□□ -0.21
Snrnp40Q6PE01 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Snrnp40Q6PE01 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Snrnp40Q6PE01 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Snrnp40Q6PE01 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.73□□□□□ -0.21
Snrnp40Q6PE01 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Snrnp40Q6PE01 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Snrnp40Q6PE01 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.72□□□□□ -0.21
Snrnp40Q6PE01 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Snrnp40Q6PE01 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Snrnp40Q6PE01 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Snrnp40Q6PE01 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Snrnp40Q6PE01 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Snrnp40Q6PE01 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Snrnp40Q6PE01 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Snrnp40Q6PE01 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Snrnp40Q6PE01 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Snrnp40Q6PE01 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.72□□□□□ -0.21
Snrnp40Q6PE01 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Snrnp40Q6PE01 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.72□□□□□ -0.21
Snrnp40Q6PE01 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Snrnp40Q6PE01 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.72□□□□□ -0.21
Snrnp40Q6PE01 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.72□□□□□ -0.21
Snrnp40Q6PE01 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Snrnp40Q6PE01 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Snrnp40Q6PE01 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Snrnp40Q6PE01 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Snrnp40Q6PE01 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Snrnp40Q6PE01 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Snrnp40Q6PE01 Gm43338-201ENSMUST00000198617 2223 ntBASIC13.72□□□□□ -0.21
Snrnp40Q6PE01 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.72□□□□□ -0.21
Snrnp40Q6PE01 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Snrnp40Q6PE01 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Snrnp40Q6PE01 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Snrnp40Q6PE01 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Snrnp40Q6PE01 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Snrnp40Q6PE01 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
Snrnp40Q6PE01 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Snrnp40Q6PE01 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Snrnp40Q6PE01 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Snrnp40Q6PE01 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.71□□□□□ -0.21
Snrnp40Q6PE01 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Snrnp40Q6PE01 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.71□□□□□ -0.21
Snrnp40Q6PE01 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.71□□□□□ -0.21
Snrnp40Q6PE01 Gm27622-201ENSMUST00000183779 60 ntBASIC13.71□□□□□ -0.21
Snrnp40Q6PE01 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Snrnp40Q6PE01 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Snrnp40Q6PE01 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.71□□□□□ -0.21
Snrnp40Q6PE01 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Snrnp40Q6PE01 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Snrnp40Q6PE01 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.71□□□□□ -0.21
Snrnp40Q6PE01 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Snrnp40Q6PE01 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.71□□□□□ -0.21
Snrnp40Q6PE01 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Snrnp40Q6PE01 Haglr-201ENSMUST00000100000 2085 ntBASIC13.71□□□□□ -0.21
Snrnp40Q6PE01 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Snrnp40Q6PE01 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Snrnp40Q6PE01 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Snrnp40Q6PE01 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Snrnp40Q6PE01 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Snrnp40Q6PE01 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Snrnp40Q6PE01 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC13.71□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms