Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf220Q6PDX6 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.91□□□□□ -0.02
Rnf220Q6PDX6 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf220Q6PDX6 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf220Q6PDX6 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf220Q6PDX6 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf220Q6PDX6 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf220Q6PDX6 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf220Q6PDX6 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf220Q6PDX6 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf220Q6PDX6 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf220Q6PDX6 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Rnf220Q6PDX6 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.91□□□□□ -0.02
Rnf220Q6PDX6 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf220Q6PDX6 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf220Q6PDX6 Gm9731-201ENSMUST00000209480 747 ntBASIC14.91□□□□□ -0.02
Rnf220Q6PDX6 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf220Q6PDX6 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf220Q6PDX6 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Rnf220Q6PDX6 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf220Q6PDX6 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.91□□□□□ -0.02
Rnf220Q6PDX6 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf220Q6PDX6 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Rnf220Q6PDX6 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf220Q6PDX6 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf220Q6PDX6 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf220Q6PDX6 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf220Q6PDX6 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf220Q6PDX6 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf220Q6PDX6 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf220Q6PDX6 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf220Q6PDX6 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf220Q6PDX6 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Rnf220Q6PDX6 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf220Q6PDX6 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf220Q6PDX6 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf220Q6PDX6 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf220Q6PDX6 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf220Q6PDX6 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf220Q6PDX6 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf220Q6PDX6 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf220Q6PDX6 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf220Q6PDX6 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf220Q6PDX6 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC14.9□□□□□ -0.02
Rnf220Q6PDX6 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf220Q6PDX6 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.9□□□□□ -0.02
Rnf220Q6PDX6 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf220Q6PDX6 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf220Q6PDX6 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf220Q6PDX6 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Rnf220Q6PDX6 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf220Q6PDX6 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Rnf220Q6PDX6 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.9□□□□□ -0.02
Rnf220Q6PDX6 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf220Q6PDX6 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf220Q6PDX6 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf220Q6PDX6 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf220Q6PDX6 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf220Q6PDX6 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf220Q6PDX6 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Rnf220Q6PDX6 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf220Q6PDX6 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf220Q6PDX6 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Rnf220Q6PDX6 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf220Q6PDX6 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf220Q6PDX6 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Rnf220Q6PDX6 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf220Q6PDX6 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf220Q6PDX6 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf220Q6PDX6 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf220Q6PDX6 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf220Q6PDX6 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Rnf220Q6PDX6 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf220Q6PDX6 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf220Q6PDX6 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.89□□□□□ -0.03
Rnf220Q6PDX6 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.89□□□□□ -0.03
Rnf220Q6PDX6 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf220Q6PDX6 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf220Q6PDX6 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf220Q6PDX6 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf220Q6PDX6 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.89□□□□□ -0.03
Rnf220Q6PDX6 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf220Q6PDX6 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.89□□□□□ -0.03
Rnf220Q6PDX6 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf220Q6PDX6 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Rnf220Q6PDX6 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf220Q6PDX6 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf220Q6PDX6 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.88□□□□□ -0.03
Rnf220Q6PDX6 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Rnf220Q6PDX6 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf220Q6PDX6 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf220Q6PDX6 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf220Q6PDX6 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf220Q6PDX6 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Rnf220Q6PDX6 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Rnf220Q6PDX6 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf220Q6PDX6 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf220Q6PDX6 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Rnf220Q6PDX6 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf220Q6PDX6 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms