Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd4Q6PDQ2 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd4Q6PDQ2 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC20.29■□□□□ 0.84
Chd4Q6PDQ2 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd4Q6PDQ2 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Chd4Q6PDQ2 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chd4Q6PDQ2 Gm15693-201ENSMUST00000120470 637 ntBASIC20.28■□□□□ 0.84
Chd4Q6PDQ2 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chd4Q6PDQ2 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chd4Q6PDQ2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chd4Q6PDQ2 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chd4Q6PDQ2 Gm13410-201ENSMUST00000117058 1415 ntBASIC20.28■□□□□ 0.84
Chd4Q6PDQ2 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC20.28■□□□□ 0.84
Chd4Q6PDQ2 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chd4Q6PDQ2 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chd4Q6PDQ2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chd4Q6PDQ2 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chd4Q6PDQ2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chd4Q6PDQ2 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Chd4Q6PDQ2 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC20.27■□□□□ 0.84
Chd4Q6PDQ2 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chd4Q6PDQ2 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chd4Q6PDQ2 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chd4Q6PDQ2 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC20.27■□□□□ 0.84
Chd4Q6PDQ2 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chd4Q6PDQ2 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chd4Q6PDQ2 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chd4Q6PDQ2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Chd4Q6PDQ2 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Chd4Q6PDQ2 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chd4Q6PDQ2 Gm13223-201ENSMUST00000118609 747 ntBASIC20.27■□□□□ 0.84
Chd4Q6PDQ2 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chd4Q6PDQ2 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC20.27■□□□□ 0.84
Chd4Q6PDQ2 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC20.27■□□□□ 0.84
Chd4Q6PDQ2 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC20.27■□□□□ 0.84
Chd4Q6PDQ2 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC20.27■□□□□ 0.84
Chd4Q6PDQ2 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chd4Q6PDQ2 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chd4Q6PDQ2 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chd4Q6PDQ2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Chd4Q6PDQ2 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chd4Q6PDQ2 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chd4Q6PDQ2 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Chd4Q6PDQ2 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chd4Q6PDQ2 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chd4Q6PDQ2 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Chd4Q6PDQ2 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
Chd4Q6PDQ2 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chd4Q6PDQ2 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC20.26■□□□□ 0.83
Chd4Q6PDQ2 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC20.26■□□□□ 0.83
Chd4Q6PDQ2 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Chd4Q6PDQ2 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Chd4Q6PDQ2 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chd4Q6PDQ2 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Chd4Q6PDQ2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chd4Q6PDQ2 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Chd4Q6PDQ2 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Chd4Q6PDQ2 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chd4Q6PDQ2 Gm27920-201ENSMUST00000183953 96 ntBASIC20.25■□□□□ 0.83
Chd4Q6PDQ2 Mir7023-201ENSMUST00000185093 64 ntBASIC20.25■□□□□ 0.83
Chd4Q6PDQ2 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chd4Q6PDQ2 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Chd4Q6PDQ2 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chd4Q6PDQ2 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chd4Q6PDQ2 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chd4Q6PDQ2 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Chd4Q6PDQ2 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC20.25■□□□□ 0.83
Chd4Q6PDQ2 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
Chd4Q6PDQ2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Chd4Q6PDQ2 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Chd4Q6PDQ2 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chd4Q6PDQ2 Gm45244-201ENSMUST00000211328 2200 ntBASIC20.25■□□□□ 0.83
Chd4Q6PDQ2 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Chd4Q6PDQ2 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chd4Q6PDQ2 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chd4Q6PDQ2 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC20.25■□□□□ 0.83
Chd4Q6PDQ2 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Chd4Q6PDQ2 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Chd4Q6PDQ2 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC20.25■□□□□ 0.83
Chd4Q6PDQ2 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC20.25■□□□□ 0.83
Chd4Q6PDQ2 Gm7774-201ENSMUST00000200064 533 ntBASIC20.25■□□□□ 0.83
Chd4Q6PDQ2 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Chd4Q6PDQ2 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC20.25■□□□□ 0.83
Chd4Q6PDQ2 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chd4Q6PDQ2 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Chd4Q6PDQ2 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC20.25■□□□□ 0.83
Chd4Q6PDQ2 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chd4Q6PDQ2 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC20.24■□□□□ 0.83
Chd4Q6PDQ2 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chd4Q6PDQ2 Gm19430-201ENSMUST00000193847 2137 ntBASIC20.24■□□□□ 0.83
Chd4Q6PDQ2 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chd4Q6PDQ2 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chd4Q6PDQ2 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chd4Q6PDQ2 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Chd4Q6PDQ2 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Chd4Q6PDQ2 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC20.24■□□□□ 0.83
Chd4Q6PDQ2 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Chd4Q6PDQ2 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Chd4Q6PDQ2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chd4Q6PDQ2 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms