Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcd3Q6P9Z1 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.43□□□□□ -0.1
Smarcd3Q6P9Z1 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.42□□□□□ -0.1
Smarcd3Q6P9Z1 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcd3Q6P9Z1 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcd3Q6P9Z1 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.42□□□□□ -0.1
Smarcd3Q6P9Z1 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcd3Q6P9Z1 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcd3Q6P9Z1 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcd3Q6P9Z1 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcd3Q6P9Z1 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcd3Q6P9Z1 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcd3Q6P9Z1 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcd3Q6P9Z1 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcd3Q6P9Z1 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcd3Q6P9Z1 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcd3Q6P9Z1 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.42□□□□□ -0.1
Smarcd3Q6P9Z1 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcd3Q6P9Z1 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcd3Q6P9Z1 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcd3Q6P9Z1 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcd3Q6P9Z1 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcd3Q6P9Z1 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.42□□□□□ -0.1
Smarcd3Q6P9Z1 Gm44430-201ENSMUST00000203376 995 ntBASIC14.42□□□□□ -0.1
Smarcd3Q6P9Z1 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcd3Q6P9Z1 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcd3Q6P9Z1 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Smarcd3Q6P9Z1 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcd3Q6P9Z1 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcd3Q6P9Z1 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Smarcd3Q6P9Z1 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcd3Q6P9Z1 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcd3Q6P9Z1 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Smarcd3Q6P9Z1 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcd3Q6P9Z1 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcd3Q6P9Z1 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.42□□□□□ -0.1
Smarcd3Q6P9Z1 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Smarcd3Q6P9Z1 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.41□□□□□ -0.1
Smarcd3Q6P9Z1 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.41□□□□□ -0.1
Smarcd3Q6P9Z1 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcd3Q6P9Z1 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Smarcd3Q6P9Z1 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcd3Q6P9Z1 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Smarcd3Q6P9Z1 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcd3Q6P9Z1 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcd3Q6P9Z1 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.41□□□□□ -0.1
Smarcd3Q6P9Z1 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcd3Q6P9Z1 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.41□□□□□ -0.1
Smarcd3Q6P9Z1 Gm18101-201ENSMUST00000215769 548 ntBASIC14.41□□□□□ -0.1
Smarcd3Q6P9Z1 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.41□□□□□ -0.1
Smarcd3Q6P9Z1 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcd3Q6P9Z1 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcd3Q6P9Z1 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Smarcd3Q6P9Z1 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcd3Q6P9Z1 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcd3Q6P9Z1 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcd3Q6P9Z1 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcd3Q6P9Z1 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcd3Q6P9Z1 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Smarcd3Q6P9Z1 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Smarcd3Q6P9Z1 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcd3Q6P9Z1 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcd3Q6P9Z1 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Smarcd3Q6P9Z1 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcd3Q6P9Z1 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Smarcd3Q6P9Z1 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcd3Q6P9Z1 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.4□□□□□ -0.1
Smarcd3Q6P9Z1 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcd3Q6P9Z1 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcd3Q6P9Z1 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcd3Q6P9Z1 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcd3Q6P9Z1 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Smarcd3Q6P9Z1 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcd3Q6P9Z1 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Smarcd3Q6P9Z1 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcd3Q6P9Z1 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Smarcd3Q6P9Z1 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Smarcd3Q6P9Z1 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcd3Q6P9Z1 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Smarcd3Q6P9Z1 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.4□□□□□ -0.1
Smarcd3Q6P9Z1 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcd3Q6P9Z1 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Smarcd3Q6P9Z1 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcd3Q6P9Z1 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.4□□□□□ -0.1
Smarcd3Q6P9Z1 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Smarcd3Q6P9Z1 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Smarcd3Q6P9Z1 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcd3Q6P9Z1 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcd3Q6P9Z1 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcd3Q6P9Z1 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcd3Q6P9Z1 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcd3Q6P9Z1 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Smarcd3Q6P9Z1 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Smarcd3Q6P9Z1 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.11
Smarcd3Q6P9Z1 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcd3Q6P9Z1 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.39□□□□□ -0.11
Smarcd3Q6P9Z1 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Smarcd3Q6P9Z1 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Smarcd3Q6P9Z1 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcd3Q6P9Z1 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms