Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.13■□□□□ 0.33
Smchd1Q6P5D8 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Smchd1Q6P5D8 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.13■□□□□ 0.33
Smchd1Q6P5D8 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.13■□□□□ 0.33
Smchd1Q6P5D8 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smchd1Q6P5D8 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smchd1Q6P5D8 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smchd1Q6P5D8 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smchd1Q6P5D8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smchd1Q6P5D8 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smchd1Q6P5D8 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Smchd1Q6P5D8 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smchd1Q6P5D8 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smchd1Q6P5D8 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Smchd1Q6P5D8 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.12■□□□□ 0.33
Smchd1Q6P5D8 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.12■□□□□ 0.33
Smchd1Q6P5D8 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC17.12■□□□□ 0.33
Smchd1Q6P5D8 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Smchd1Q6P5D8 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.12■□□□□ 0.33
Smchd1Q6P5D8 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smchd1Q6P5D8 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smchd1Q6P5D8 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smchd1Q6P5D8 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smchd1Q6P5D8 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
Smchd1Q6P5D8 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smchd1Q6P5D8 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smchd1Q6P5D8 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smchd1Q6P5D8 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smchd1Q6P5D8 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smchd1Q6P5D8 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smchd1Q6P5D8 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smchd1Q6P5D8 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.11■□□□□ 0.33
Smchd1Q6P5D8 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smchd1Q6P5D8 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Smchd1Q6P5D8 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smchd1Q6P5D8 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.11■□□□□ 0.33
Smchd1Q6P5D8 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.11■□□□□ 0.33
Smchd1Q6P5D8 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smchd1Q6P5D8 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smchd1Q6P5D8 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smchd1Q6P5D8 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smchd1Q6P5D8 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smchd1Q6P5D8 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smchd1Q6P5D8 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smchd1Q6P5D8 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Smchd1Q6P5D8 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smchd1Q6P5D8 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smchd1Q6P5D8 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smchd1Q6P5D8 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smchd1Q6P5D8 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.11■□□□□ 0.33
Smchd1Q6P5D8 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.11■□□□□ 0.33
Smchd1Q6P5D8 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Smchd1Q6P5D8 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Smchd1Q6P5D8 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Smchd1Q6P5D8 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.11■□□□□ 0.33
Smchd1Q6P5D8 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Smchd1Q6P5D8 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smchd1Q6P5D8 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smchd1Q6P5D8 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Smchd1Q6P5D8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smchd1Q6P5D8 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smchd1Q6P5D8 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Smchd1Q6P5D8 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smchd1Q6P5D8 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smchd1Q6P5D8 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.1■□□□□ 0.33
Smchd1Q6P5D8 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.1■□□□□ 0.33
Smchd1Q6P5D8 Gm12008-201ENSMUST00000117791 755 ntBASIC17.1■□□□□ 0.33
Smchd1Q6P5D8 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.1■□□□□ 0.33
Smchd1Q6P5D8 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Smchd1Q6P5D8 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smchd1Q6P5D8 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smchd1Q6P5D8 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smchd1Q6P5D8 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Smchd1Q6P5D8 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smchd1Q6P5D8 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.1■□□□□ 0.33
Smchd1Q6P5D8 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smchd1Q6P5D8 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.1■□□□□ 0.33
Smchd1Q6P5D8 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.1■□□□□ 0.33
Smchd1Q6P5D8 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smchd1Q6P5D8 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.09■□□□□ 0.33
Smchd1Q6P5D8 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC17.09■□□□□ 0.33
Smchd1Q6P5D8 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
Smchd1Q6P5D8 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smchd1Q6P5D8 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smchd1Q6P5D8 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smchd1Q6P5D8 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smchd1Q6P5D8 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smchd1Q6P5D8 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smchd1Q6P5D8 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smchd1Q6P5D8 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smchd1Q6P5D8 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smchd1Q6P5D8 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smchd1Q6P5D8 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smchd1Q6P5D8 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smchd1Q6P5D8 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smchd1Q6P5D8 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smchd1Q6P5D8 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smchd1Q6P5D8 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.09■□□□□ 0.33
Smchd1Q6P5D8 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smchd1Q6P5D8 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms