Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.54■□□□□ 0.4
Hdac4Q6NZM9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Hdac4Q6NZM9 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac4Q6NZM9 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac4Q6NZM9 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Hdac4Q6NZM9 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac4Q6NZM9 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac4Q6NZM9 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Hdac4Q6NZM9 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Hdac4Q6NZM9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac4Q6NZM9 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hdac4Q6NZM9 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.54■□□□□ 0.4
Hdac4Q6NZM9 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.54■□□□□ 0.4
Hdac4Q6NZM9 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac4Q6NZM9 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.53■□□□□ 0.4
Hdac4Q6NZM9 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac4Q6NZM9 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac4Q6NZM9 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac4Q6NZM9 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac4Q6NZM9 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.53■□□□□ 0.4
Hdac4Q6NZM9 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac4Q6NZM9 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac4Q6NZM9 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.53■□□□□ 0.4
Hdac4Q6NZM9 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac4Q6NZM9 Gm12644-201ENSMUST00000119935 606 ntBASIC17.53■□□□□ 0.4
Hdac4Q6NZM9 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac4Q6NZM9 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac4Q6NZM9 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.53■□□□□ 0.4
Hdac4Q6NZM9 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac4Q6NZM9 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac4Q6NZM9 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac4Q6NZM9 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac4Q6NZM9 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac4Q6NZM9 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac4Q6NZM9 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac4Q6NZM9 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac4Q6NZM9 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac4Q6NZM9 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.52■□□□□ 0.4
Hdac4Q6NZM9 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac4Q6NZM9 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Hdac4Q6NZM9 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac4Q6NZM9 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac4Q6NZM9 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac4Q6NZM9 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac4Q6NZM9 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Hdac4Q6NZM9 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac4Q6NZM9 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac4Q6NZM9 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac4Q6NZM9 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac4Q6NZM9 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac4Q6NZM9 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac4Q6NZM9 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Hdac4Q6NZM9 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac4Q6NZM9 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac4Q6NZM9 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac4Q6NZM9 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
Hdac4Q6NZM9 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac4Q6NZM9 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac4Q6NZM9 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac4Q6NZM9 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac4Q6NZM9 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hdac4Q6NZM9 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hdac4Q6NZM9 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Hdac4Q6NZM9 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Hdac4Q6NZM9 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac4Q6NZM9 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Hdac4Q6NZM9 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac4Q6NZM9 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac4Q6NZM9 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac4Q6NZM9 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac4Q6NZM9 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.51■□□□□ 0.39
Hdac4Q6NZM9 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.51■□□□□ 0.39
Hdac4Q6NZM9 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.51■□□□□ 0.39
Hdac4Q6NZM9 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac4Q6NZM9 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.51■□□□□ 0.39
Hdac4Q6NZM9 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Hdac4Q6NZM9 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.51■□□□□ 0.39
Hdac4Q6NZM9 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac4Q6NZM9 Gm19164-201ENSMUST00000210667 640 ntBASIC17.51■□□□□ 0.39
Hdac4Q6NZM9 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac4Q6NZM9 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac4Q6NZM9 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac4Q6NZM9 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.51■□□□□ 0.39
Hdac4Q6NZM9 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac4Q6NZM9 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.51■□□□□ 0.39
Hdac4Q6NZM9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Hdac4Q6NZM9 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac4Q6NZM9 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac4Q6NZM9 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hdac4Q6NZM9 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hdac4Q6NZM9 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hdac4Q6NZM9 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.5■□□□□ 0.39
Hdac4Q6NZM9 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hdac4Q6NZM9 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hdac4Q6NZM9 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.5■□□□□ 0.39
Hdac4Q6NZM9 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hdac4Q6NZM9 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.5■□□□□ 0.39
Hdac4Q6NZM9 Gm8344-201ENSMUST00000119813 856 ntBASIC17.5■□□□□ 0.39
Hdac4Q6NZM9 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.5■□□□□ 0.39
Hdac4Q6NZM9 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms