Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Scube3Q66PY1 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Scube3Q66PY1 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scube3Q66PY1 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scube3Q66PY1 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scube3Q66PY1 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scube3Q66PY1 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Scube3Q66PY1 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.44■□□□□ 0.22
Scube3Q66PY1 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Scube3Q66PY1 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Scube3Q66PY1 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Scube3Q66PY1 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Scube3Q66PY1 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Scube3Q66PY1 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scube3Q66PY1 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.44■□□□□ 0.22
Scube3Q66PY1 Gm32390-201ENSMUST00000212713 1172 ntBASIC16.44■□□□□ 0.22
Scube3Q66PY1 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.44■□□□□ 0.22
Scube3Q66PY1 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scube3Q66PY1 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scube3Q66PY1 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Scube3Q66PY1 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Scube3Q66PY1 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scube3Q66PY1 App-207ENSMUST00000227737 2827 ntBASIC16.44■□□□□ 0.22
Scube3Q66PY1 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scube3Q66PY1 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scube3Q66PY1 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scube3Q66PY1 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.43■□□□□ 0.22
Scube3Q66PY1 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Scube3Q66PY1 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Scube3Q66PY1 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scube3Q66PY1 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scube3Q66PY1 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scube3Q66PY1 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scube3Q66PY1 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scube3Q66PY1 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Scube3Q66PY1 Gm7230-201ENSMUST00000173026 815 ntBASIC16.43■□□□□ 0.22
Scube3Q66PY1 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scube3Q66PY1 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Scube3Q66PY1 Gm19164-201ENSMUST00000210667 640 ntBASIC16.43■□□□□ 0.22
Scube3Q66PY1 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scube3Q66PY1 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Scube3Q66PY1 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Scube3Q66PY1 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.43■□□□□ 0.22
Scube3Q66PY1 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scube3Q66PY1 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scube3Q66PY1 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.43■□□□□ 0.22
Scube3Q66PY1 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scube3Q66PY1 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.43■□□□□ 0.22
Scube3Q66PY1 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scube3Q66PY1 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scube3Q66PY1 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Scube3Q66PY1 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.43■□□□□ 0.22
Scube3Q66PY1 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scube3Q66PY1 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scube3Q66PY1 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Scube3Q66PY1 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scube3Q66PY1 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scube3Q66PY1 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scube3Q66PY1 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Scube3Q66PY1 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Scube3Q66PY1 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Scube3Q66PY1 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scube3Q66PY1 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scube3Q66PY1 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scube3Q66PY1 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Scube3Q66PY1 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scube3Q66PY1 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.42■□□□□ 0.22
Scube3Q66PY1 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scube3Q66PY1 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scube3Q66PY1 Gm15173-201ENSMUST00000122049 433 ntBASIC16.42■□□□□ 0.22
Scube3Q66PY1 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.42■□□□□ 0.22
Scube3Q66PY1 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.42■□□□□ 0.22
Scube3Q66PY1 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Scube3Q66PY1 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scube3Q66PY1 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scube3Q66PY1 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scube3Q66PY1 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scube3Q66PY1 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scube3Q66PY1 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scube3Q66PY1 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scube3Q66PY1 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scube3Q66PY1 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scube3Q66PY1 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scube3Q66PY1 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Scube3Q66PY1 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Scube3Q66PY1 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scube3Q66PY1 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scube3Q66PY1 Gm6754-201ENSMUST00000117124 913 ntBASIC16.41■□□□□ 0.22
Scube3Q66PY1 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Scube3Q66PY1 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.41■□□□□ 0.22
Scube3Q66PY1 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.41■□□□□ 0.22
Scube3Q66PY1 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Scube3Q66PY1 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Scube3Q66PY1 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scube3Q66PY1 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC16.41■□□□□ 0.22
Scube3Q66PY1 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scube3Q66PY1 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Scube3Q66PY1 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Scube3Q66PY1 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.41■□□□□ 0.22
Scube3Q66PY1 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms