Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Clcn1Q64347 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC19.78■□□□□ 0.76
Clcn1Q64347 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clcn1Q64347 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Clcn1Q64347 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC19.78■□□□□ 0.76
Clcn1Q64347 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clcn1Q64347 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clcn1Q64347 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clcn1Q64347 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Clcn1Q64347 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clcn1Q64347 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Clcn1Q64347 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clcn1Q64347 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Clcn1Q64347 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clcn1Q64347 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Clcn1Q64347 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clcn1Q64347 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clcn1Q64347 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clcn1Q64347 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clcn1Q64347 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clcn1Q64347 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clcn1Q64347 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC19.77■□□□□ 0.76
Clcn1Q64347 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Clcn1Q64347 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Clcn1Q64347 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clcn1Q64347 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.77■□□□□ 0.76
Clcn1Q64347 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Clcn1Q64347 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.77■□□□□ 0.76
Clcn1Q64347 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC19.77■□□□□ 0.76
Clcn1Q64347 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC19.77■□□□□ 0.76
Clcn1Q64347 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Clcn1Q64347 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clcn1Q64347 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Clcn1Q64347 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clcn1Q64347 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC19.77■□□□□ 0.75
Clcn1Q64347 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Clcn1Q64347 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Clcn1Q64347 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Clcn1Q64347 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Clcn1Q64347 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clcn1Q64347 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Clcn1Q64347 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clcn1Q64347 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clcn1Q64347 Gm15920-201ENSMUST00000118998 402 ntBASIC19.76■□□□□ 0.75
Clcn1Q64347 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Clcn1Q64347 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clcn1Q64347 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Clcn1Q64347 AC151836.1-202ENSMUST00000226259 753 ntBASIC19.76■□□□□ 0.75
Clcn1Q64347 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Clcn1Q64347 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC19.76■□□□□ 0.75
Clcn1Q64347 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clcn1Q64347 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clcn1Q64347 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clcn1Q64347 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clcn1Q64347 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Clcn1Q64347 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clcn1Q64347 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clcn1Q64347 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clcn1Q64347 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clcn1Q64347 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Clcn1Q64347 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clcn1Q64347 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Clcn1Q64347 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Clcn1Q64347 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clcn1Q64347 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clcn1Q64347 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC19.75■□□□□ 0.75
Clcn1Q64347 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Clcn1Q64347 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Clcn1Q64347 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Clcn1Q64347 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clcn1Q64347 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Clcn1Q64347 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clcn1Q64347 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC19.75■□□□□ 0.75
Clcn1Q64347 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC19.75■□□□□ 0.75
Clcn1Q64347 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC19.75■□□□□ 0.75
Clcn1Q64347 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clcn1Q64347 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Clcn1Q64347 Gm8396-201ENSMUST00000057361 823 ntBASIC19.75■□□□□ 0.75
Clcn1Q64347 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clcn1Q64347 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
Clcn1Q64347 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Clcn1Q64347 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Clcn1Q64347 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clcn1Q64347 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clcn1Q64347 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Clcn1Q64347 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.75■□□□□ 0.75
Clcn1Q64347 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Clcn1Q64347 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Clcn1Q64347 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.74■□□□□ 0.75
Clcn1Q64347 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Clcn1Q64347 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Clcn1Q64347 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Clcn1Q64347 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clcn1Q64347 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Clcn1Q64347 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC19.74■□□□□ 0.75
Clcn1Q64347 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clcn1Q64347 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clcn1Q64347 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Clcn1Q64347 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clcn1Q64347 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms