Protein–RNA interactions for Protein: Q63739

Ptp4a1, Protein tyrosine phosphatase type IVA 1, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptp4a1Q63739 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ptp4a1Q63739 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.13□□□□□ -0.15
Ptp4a1Q63739 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ptp4a1Q63739 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ptp4a1Q63739 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ptp4a1Q63739 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ptp4a1Q63739 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ptp4a1Q63739 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.12□□□□□ -0.15
Ptp4a1Q63739 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ptp4a1Q63739 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ptp4a1Q63739 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ptp4a1Q63739 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ptp4a1Q63739 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ptp4a1Q63739 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.12□□□□□ -0.15
Ptp4a1Q63739 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ptp4a1Q63739 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ptp4a1Q63739 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ptp4a1Q63739 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ptp4a1Q63739 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ptp4a1Q63739 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ptp4a1Q63739 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ptp4a1Q63739 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ptp4a1Q63739 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ptp4a1Q63739 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ptp4a1Q63739 Gm5587-201ENSMUST00000206270 674 ntBASIC14.12□□□□□ -0.15
Ptp4a1Q63739 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ptp4a1Q63739 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ptp4a1Q63739 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ptp4a1Q63739 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ptp4a1Q63739 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ptp4a1Q63739 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ptp4a1Q63739 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ptp4a1Q63739 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Ptp4a1Q63739 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ptp4a1Q63739 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.12□□□□□ -0.15
Ptp4a1Q63739 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Ptp4a1Q63739 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ptp4a1Q63739 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ptp4a1Q63739 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ptp4a1Q63739 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptp4a1Q63739 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ptp4a1Q63739 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptp4a1Q63739 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ptp4a1Q63739 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptp4a1Q63739 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptp4a1Q63739 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptp4a1Q63739 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptp4a1Q63739 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ptp4a1Q63739 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ptp4a1Q63739 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptp4a1Q63739 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptp4a1Q63739 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptp4a1Q63739 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptp4a1Q63739 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptp4a1Q63739 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptp4a1Q63739 Mir770-201ENSMUST00000103252 94 ntBASIC14.11□□□□□ -0.15
Ptp4a1Q63739 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Ptp4a1Q63739 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Ptp4a1Q63739 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptp4a1Q63739 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ptp4a1Q63739 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.11□□□□□ -0.15
Ptp4a1Q63739 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptp4a1Q63739 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ptp4a1Q63739 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.11□□□□□ -0.15
Ptp4a1Q63739 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ptp4a1Q63739 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptp4a1Q63739 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.11□□□□□ -0.15
Ptp4a1Q63739 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptp4a1Q63739 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptp4a1Q63739 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptp4a1Q63739 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptp4a1Q63739 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptp4a1Q63739 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ptp4a1Q63739 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ptp4a1Q63739 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ptp4a1Q63739 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ptp4a1Q63739 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.1□□□□□ -0.15
Ptp4a1Q63739 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Ptp4a1Q63739 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ptp4a1Q63739 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ptp4a1Q63739 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ptp4a1Q63739 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Ptp4a1Q63739 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ptp4a1Q63739 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ptp4a1Q63739 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ptp4a1Q63739 Gm23634-201ENSMUST00000175071 91 ntBASIC14.1□□□□□ -0.15
Ptp4a1Q63739 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.1□□□□□ -0.15
Ptp4a1Q63739 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ptp4a1Q63739 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.1□□□□□ -0.15
Ptp4a1Q63739 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ptp4a1Q63739 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ptp4a1Q63739 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ptp4a1Q63739 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ptp4a1Q63739 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ptp4a1Q63739 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ptp4a1Q63739 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.1□□□□□ -0.15
Ptp4a1Q63739 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ptp4a1Q63739 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ptp4a1Q63739 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ptp4a1Q63739 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms