Protein–RNA interactions for Protein: Q62247

Sox16, Protein SOX-16 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox16Q62247 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sox16Q62247 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sox16Q62247 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sox16Q62247 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC8.84□□□□□ -0.99
Sox16Q62247 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Sox16Q62247 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sox16Q62247 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Sox16Q62247 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sox16Q62247 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sox16Q62247 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Sox16Q62247 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC8.84□□□□□ -0.99
Sox16Q62247 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Sox16Q62247 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Sox16Q62247 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sox16Q62247 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sox16Q62247 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Sox16Q62247 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC8.84□□□□□ -0.99
Sox16Q62247 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Sox16Q62247 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sox16Q62247 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Sox16Q62247 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sox16Q62247 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sox16Q62247 Idnk-204ENSMUST00000226010 1898 ntBASIC8.84□□□□□ -0.99
Sox16Q62247 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sox16Q62247 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sox16Q62247 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sox16Q62247 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Sox16Q62247 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sox16Q62247 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sox16Q62247 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Sox16Q62247 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sox16Q62247 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sox16Q62247 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sox16Q62247 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Sox16Q62247 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sox16Q62247 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sox16Q62247 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Sox16Q62247 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sox16Q62247 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sox16Q62247 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Sox16Q62247 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Sox16Q62247 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sox16Q62247 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
Sox16Q62247 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Sox16Q62247 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Sox16Q62247 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Sox16Q62247 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Sox16Q62247 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -1
Sox16Q62247 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Sox16Q62247 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
Sox16Q62247 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Sox16Q62247 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC8.83□□□□□ -1
Sox16Q62247 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC8.83□□□□□ -1
Sox16Q62247 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Sox16Q62247 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Sox16Q62247 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC8.83□□□□□ -1
Sox16Q62247 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC8.83□□□□□ -1
Sox16Q62247 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC8.83□□□□□ -1
Sox16Q62247 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC8.83□□□□□ -1
Sox16Q62247 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Sox16Q62247 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC8.83□□□□□ -1
Sox16Q62247 Gm38094-201ENSMUST00000195864 2978 ntBASIC8.83□□□□□ -1
Sox16Q62247 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Sox16Q62247 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Sox16Q62247 Gm42449-201ENSMUST00000200349 2258 ntBASIC8.83□□□□□ -1
Sox16Q62247 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Sox16Q62247 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Sox16Q62247 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC8.83□□□□□ -1
Sox16Q62247 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Sox16Q62247 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
Sox16Q62247 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC8.83□□□□□ -1
Sox16Q62247 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC8.83□□□□□ -1
Sox16Q62247 Paupar-201ENSMUST00000194826 3482 ntBASIC8.83□□□□□ -1
Sox16Q62247 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Sox16Q62247 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Sox16Q62247 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Sox16Q62247 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC8.83□□□□□ -1
Sox16Q62247 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Sox16Q62247 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Sox16Q62247 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC8.83□□□□□ -1
Sox16Q62247 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Sox16Q62247 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Sox16Q62247 Gm44745-201ENSMUST00000206563 2723 ntBASIC8.83□□□□□ -1
Sox16Q62247 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC8.83□□□□□ -1
Sox16Q62247 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Sox16Q62247 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Sox16Q62247 Gm5357-201ENSMUST00000212720 1924 ntBASIC8.83□□□□□ -1
Sox16Q62247 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC8.83□□□□□ -1
Sox16Q62247 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Sox16Q62247 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Sox16Q62247 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Sox16Q62247 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Sox16Q62247 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Sox16Q62247 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Sox16Q62247 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Sox16Q62247 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC8.83□□□□□ -1
Sox16Q62247 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Sox16Q62247 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Sox16Q62247 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Sox16Q62247 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms