Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Six3Q62233 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Six3Q62233 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Six3Q62233 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Six3Q62233 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Six3Q62233 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Six3Q62233 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Six3Q62233 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Six3Q62233 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Six3Q62233 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Six3Q62233 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Six3Q62233 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Six3Q62233 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Six3Q62233 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.33■□□□□ 0.05
Six3Q62233 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
Six3Q62233 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Six3Q62233 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Six3Q62233 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Six3Q62233 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Six3Q62233 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Six3Q62233 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Six3Q62233 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Six3Q62233 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Six3Q62233 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Six3Q62233 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.33■□□□□ 0.04
Six3Q62233 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Six3Q62233 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Six3Q62233 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.33■□□□□ 0.04
Six3Q62233 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Six3Q62233 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Six3Q62233 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Six3Q62233 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Six3Q62233 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Six3Q62233 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Six3Q62233 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Six3Q62233 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Six3Q62233 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Six3Q62233 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Six3Q62233 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Six3Q62233 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.32■□□□□ 0.04
Six3Q62233 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Six3Q62233 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Six3Q62233 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Six3Q62233 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Six3Q62233 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Six3Q62233 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Six3Q62233 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Six3Q62233 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Six3Q62233 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Six3Q62233 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Six3Q62233 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Six3Q62233 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Six3Q62233 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Six3Q62233 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Six3Q62233 BC037039-201ENSMUST00000192003 2205 ntBASIC15.32■□□□□ 0.04
Six3Q62233 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Six3Q62233 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Six3Q62233 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Six3Q62233 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Six3Q62233 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Six3Q62233 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Six3Q62233 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Six3Q62233 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Six3Q62233 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Six3Q62233 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Six3Q62233 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Six3Q62233 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Six3Q62233 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Six3Q62233 Olfr129-201ENSMUST00000122318 993 ntBASIC15.31■□□□□ 0.04
Six3Q62233 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.31■□□□□ 0.04
Six3Q62233 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.31■□□□□ 0.04
Six3Q62233 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.31■□□□□ 0.04
Six3Q62233 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.31■□□□□ 0.04
Six3Q62233 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Six3Q62233 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Six3Q62233 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Six3Q62233 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Six3Q62233 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Six3Q62233 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Six3Q62233 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Six3Q62233 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Six3Q62233 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Six3Q62233 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Six3Q62233 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.31■□□□□ 0.04
Six3Q62233 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Six3Q62233 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Six3Q62233 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.31■□□□□ 0.04
Six3Q62233 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Six3Q62233 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Six3Q62233 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Six3Q62233 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Six3Q62233 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Six3Q62233 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Six3Q62233 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Six3Q62233 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Six3Q62233 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Six3Q62233 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Six3Q62233 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Six3Q62233 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Six3Q62233 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms