Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.47□□□□□ -0.09
Clcn4Q61418 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcn4Q61418 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcn4Q61418 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Clcn4Q61418 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Clcn4Q61418 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcn4Q61418 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Clcn4Q61418 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcn4Q61418 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcn4Q61418 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcn4Q61418 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.47□□□□□ -0.09
Clcn4Q61418 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Clcn4Q61418 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.47□□□□□ -0.09
Clcn4Q61418 Mir770-201ENSMUST00000103252 94 ntBASIC14.47□□□□□ -0.09
Clcn4Q61418 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcn4Q61418 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Clcn4Q61418 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Clcn4Q61418 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Clcn4Q61418 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcn4Q61418 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Clcn4Q61418 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Clcn4Q61418 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcn4Q61418 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcn4Q61418 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcn4Q61418 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.47□□□□□ -0.09
Clcn4Q61418 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcn4Q61418 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcn4Q61418 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcn4Q61418 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcn4Q61418 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Clcn4Q61418 App-207ENSMUST00000227737 2827 ntBASIC14.47□□□□□ -0.09
Clcn4Q61418 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcn4Q61418 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clcn4Q61418 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clcn4Q61418 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clcn4Q61418 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clcn4Q61418 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.46□□□□□ -0.09
Clcn4Q61418 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clcn4Q61418 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clcn4Q61418 Asic1-205ENSMUST00000228185 1818 ntBASIC14.46□□□□□ -0.09
Clcn4Q61418 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clcn4Q61418 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clcn4Q61418 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clcn4Q61418 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clcn4Q61418 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clcn4Q61418 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Clcn4Q61418 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Clcn4Q61418 Mir3081-201ENSMUST00000175305 84 ntBASIC14.46□□□□□ -0.09
Clcn4Q61418 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clcn4Q61418 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Clcn4Q61418 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clcn4Q61418 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clcn4Q61418 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clcn4Q61418 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Clcn4Q61418 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
Clcn4Q61418 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Clcn4Q61418 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clcn4Q61418 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clcn4Q61418 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Clcn4Q61418 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.1
Clcn4Q61418 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clcn4Q61418 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Clcn4Q61418 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Clcn4Q61418 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clcn4Q61418 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Clcn4Q61418 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcn4Q61418 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Clcn4Q61418 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcn4Q61418 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clcn4Q61418 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcn4Q61418 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcn4Q61418 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcn4Q61418 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcn4Q61418 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcn4Q61418 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcn4Q61418 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.45□□□□□ -0.1
Clcn4Q61418 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcn4Q61418 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.45□□□□□ -0.1
Clcn4Q61418 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clcn4Q61418 Gm10052-201ENSMUST00000168019 960 ntBASIC14.45□□□□□ -0.1
Clcn4Q61418 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clcn4Q61418 Gm28033-201ENSMUST00000184224 96 ntBASIC14.45□□□□□ -0.1
Clcn4Q61418 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.45□□□□□ -0.1
Clcn4Q61418 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.45□□□□□ -0.1
Clcn4Q61418 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Clcn4Q61418 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcn4Q61418 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcn4Q61418 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcn4Q61418 Gm7729-201ENSMUST00000050143 801 ntBASIC14.45□□□□□ -0.1
Clcn4Q61418 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcn4Q61418 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Clcn4Q61418 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Clcn4Q61418 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Clcn4Q61418 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcn4Q61418 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcn4Q61418 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.45□□□□□ -0.1
Clcn4Q61418 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcn4Q61418 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcn4Q61418 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Clcn4Q61418 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms