Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ift88Q61371 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ift88Q61371 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ift88Q61371 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ift88Q61371 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ift88Q61371 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ift88Q61371 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ift88Q61371 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ift88Q61371 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.36■□□□□ 0.37
Ift88Q61371 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ift88Q61371 Gm9987-201ENSMUST00000069768 567 ntBASIC17.36■□□□□ 0.37
Ift88Q61371 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ift88Q61371 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ift88Q61371 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Ift88Q61371 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ift88Q61371 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ift88Q61371 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ift88Q61371 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.36■□□□□ 0.37
Ift88Q61371 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ift88Q61371 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ift88Q61371 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ift88Q61371 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.35■□□□□ 0.37
Ift88Q61371 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ift88Q61371 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ift88Q61371 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ift88Q61371 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ift88Q61371 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ift88Q61371 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ift88Q61371 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ift88Q61371 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ift88Q61371 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ift88Q61371 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ift88Q61371 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ift88Q61371 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.35■□□□□ 0.37
Ift88Q61371 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ift88Q61371 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ift88Q61371 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ift88Q61371 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ift88Q61371 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ift88Q61371 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ift88Q61371 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ift88Q61371 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ift88Q61371 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ift88Q61371 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ift88Q61371 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Ift88Q61371 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ift88Q61371 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ift88Q61371 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ift88Q61371 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ift88Q61371 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Ift88Q61371 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.34■□□□□ 0.37
Ift88Q61371 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ift88Q61371 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ift88Q61371 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ift88Q61371 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Ift88Q61371 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Ift88Q61371 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ift88Q61371 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.34■□□□□ 0.37
Ift88Q61371 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ift88Q61371 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ift88Q61371 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Ift88Q61371 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ift88Q61371 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.34■□□□□ 0.37
Ift88Q61371 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ift88Q61371 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ift88Q61371 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ift88Q61371 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Ift88Q61371 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ift88Q61371 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Ift88Q61371 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ift88Q61371 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Ift88Q61371 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ift88Q61371 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Ift88Q61371 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ift88Q61371 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ift88Q61371 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ift88Q61371 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
Ift88Q61371 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.33■□□□□ 0.37
Ift88Q61371 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ift88Q61371 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ift88Q61371 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ift88Q61371 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Ift88Q61371 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ift88Q61371 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.33■□□□□ 0.36
Ift88Q61371 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Ift88Q61371 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ift88Q61371 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ift88Q61371 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.33■□□□□ 0.36
Ift88Q61371 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ift88Q61371 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ift88Q61371 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ift88Q61371 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.32■□□□□ 0.36
Ift88Q61371 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ift88Q61371 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ift88Q61371 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ift88Q61371 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.32■□□□□ 0.36
Ift88Q61371 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ift88Q61371 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ift88Q61371 Gm6623-201ENSMUST00000173570 544 ntBASIC17.32■□□□□ 0.36
Ift88Q61371 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms