Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ptch1Q61115 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ptch1Q61115 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ptch1Q61115 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Ptch1Q61115 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Ptch1Q61115 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ptch1Q61115 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC22.39■■□□□ 1.17
Ptch1Q61115 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC22.39■■□□□ 1.17
Ptch1Q61115 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ptch1Q61115 AC154239.3-201ENSMUST00000226933 674 ntBASIC22.39■■□□□ 1.17
Ptch1Q61115 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Ptch1Q61115 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ptch1Q61115 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ptch1Q61115 Gm6180-201ENSMUST00000065243 498 ntBASIC22.39■■□□□ 1.17
Ptch1Q61115 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Ptch1Q61115 Gm6263-201ENSMUST00000120029 1342 ntBASIC22.39■■□□□ 1.17
Ptch1Q61115 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC22.38■■□□□ 1.17
Ptch1Q61115 Gm7669-201ENSMUST00000210184 1603 ntBASIC22.38■■□□□ 1.17
Ptch1Q61115 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Ptch1Q61115 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC22.38■■□□□ 1.17
Ptch1Q61115 Gm14722-201ENSMUST00000118943 689 ntBASIC22.38■■□□□ 1.17
Ptch1Q61115 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC22.38■■□□□ 1.17
Ptch1Q61115 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Ptch1Q61115 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC22.38■■□□□ 1.17
Ptch1Q61115 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ptch1Q61115 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Ptch1Q61115 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Ptch1Q61115 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC22.37■■□□□ 1.17
Ptch1Q61115 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ptch1Q61115 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Ptch1Q61115 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Ptch1Q61115 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC22.37■■□□□ 1.17
Ptch1Q61115 Gm29667-201ENSMUST00000190817 490 ntBASIC22.37■■□□□ 1.17
Ptch1Q61115 Gm6745-201ENSMUST00000199216 526 ntBASIC22.37■■□□□ 1.17
Ptch1Q61115 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC22.37■■□□□ 1.17
Ptch1Q61115 Gm45059-201ENSMUST00000205558 1077 ntBASIC22.37■■□□□ 1.17
Ptch1Q61115 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC22.37■■□□□ 1.17
Ptch1Q61115 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Ptch1Q61115 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ptch1Q61115 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ptch1Q61115 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Ptch1Q61115 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
Ptch1Q61115 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Ptch1Q61115 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Ptch1Q61115 Klk2-ps-201ENSMUST00000205342 571 ntBASIC22.36■■□□□ 1.17
Ptch1Q61115 AC154231.1-201ENSMUST00000220564 2175 ntBASIC22.36■■□□□ 1.17
Ptch1Q61115 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ptch1Q61115 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ptch1Q61115 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Ptch1Q61115 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ptch1Q61115 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ptch1Q61115 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Ptch1Q61115 Gm23984-201ENSMUST00000157139 203 ntBASIC22.35■■□□□ 1.17
Ptch1Q61115 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC22.35■■□□□ 1.17
Ptch1Q61115 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ptch1Q61115 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ptch1Q61115 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
Ptch1Q61115 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ptch1Q61115 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ptch1Q61115 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
Ptch1Q61115 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ptch1Q61115 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ptch1Q61115 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ptch1Q61115 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ptch1Q61115 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ptch1Q61115 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC22.34■■□□□ 1.17
Ptch1Q61115 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Ptch1Q61115 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Ptch1Q61115 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC22.34■■□□□ 1.17
Ptch1Q61115 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC22.34■■□□□ 1.17
Ptch1Q61115 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Ptch1Q61115 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC22.34■■□□□ 1.17
Ptch1Q61115 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ptch1Q61115 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ptch1Q61115 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ptch1Q61115 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ptch1Q61115 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Ptch1Q61115 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ptch1Q61115 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ptch1Q61115 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ptch1Q61115 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ptch1Q61115 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Ptch1Q61115 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ptch1Q61115 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Ptch1Q61115 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ptch1Q61115 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC22.33■■□□□ 1.17
Ptch1Q61115 Gm44719-201ENSMUST00000206404 149 ntBASIC22.33■■□□□ 1.17
Ptch1Q61115 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC22.33■■□□□ 1.17
Ptch1Q61115 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Ptch1Q61115 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ptch1Q61115 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ptch1Q61115 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC22.33■■□□□ 1.17
Ptch1Q61115 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ptch1Q61115 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Ptch1Q61115 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
Ptch1Q61115 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Ptch1Q61115 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Ptch1Q61115 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Ptch1Q61115 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC22.33■■□□□ 1.16
Ptch1Q61115 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC22.33■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms