Protein–RNA interactions for Protein: Q60722

Tcf4, Transcription factor 4, mousemouse

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcf4Q60722 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tcf4Q60722 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tcf4Q60722 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tcf4Q60722 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tcf4Q60722 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Tcf4Q60722 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tcf4Q60722 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.33■□□□□ 0.2
Tcf4Q60722 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tcf4Q60722 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tcf4Q60722 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.33■□□□□ 0.2
Tcf4Q60722 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.32■□□□□ 0.2
Tcf4Q60722 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.32■□□□□ 0.2
Tcf4Q60722 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tcf4Q60722 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tcf4Q60722 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Tcf4Q60722 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tcf4Q60722 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tcf4Q60722 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tcf4Q60722 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tcf4Q60722 Gm14859-201ENSMUST00000117752 357 ntBASIC16.32■□□□□ 0.2
Tcf4Q60722 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tcf4Q60722 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tcf4Q60722 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.32■□□□□ 0.2
Tcf4Q60722 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Tcf4Q60722 Gm25745-201ENSMUST00000174945 133 ntBASIC16.32■□□□□ 0.2
Tcf4Q60722 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tcf4Q60722 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.32■□□□□ 0.2
Tcf4Q60722 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.32■□□□□ 0.2
Tcf4Q60722 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Tcf4Q60722 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tcf4Q60722 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tcf4Q60722 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tcf4Q60722 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tcf4Q60722 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tcf4Q60722 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tcf4Q60722 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Tcf4Q60722 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tcf4Q60722 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.31■□□□□ 0.2
Tcf4Q60722 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tcf4Q60722 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tcf4Q60722 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tcf4Q60722 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tcf4Q60722 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tcf4Q60722 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Tcf4Q60722 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tcf4Q60722 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tcf4Q60722 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.31■□□□□ 0.2
Tcf4Q60722 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.31■□□□□ 0.2
Tcf4Q60722 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tcf4Q60722 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tcf4Q60722 Gm7506-201ENSMUST00000207758 815 ntBASIC16.31■□□□□ 0.2
Tcf4Q60722 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.31■□□□□ 0.2
Tcf4Q60722 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.31■□□□□ 0.2
Tcf4Q60722 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tcf4Q60722 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tcf4Q60722 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tcf4Q60722 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tcf4Q60722 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tcf4Q60722 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tcf4Q60722 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tcf4Q60722 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tcf4Q60722 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Tcf4Q60722 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tcf4Q60722 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.31■□□□□ 0.2
Tcf4Q60722 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tcf4Q60722 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcf4Q60722 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcf4Q60722 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.3■□□□□ 0.2
Tcf4Q60722 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcf4Q60722 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcf4Q60722 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcf4Q60722 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tcf4Q60722 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcf4Q60722 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcf4Q60722 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Tcf4Q60722 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Tcf4Q60722 Ank2-226ENSMUST00000189368 339 ntBASIC16.3■□□□□ 0.2
Tcf4Q60722 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcf4Q60722 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcf4Q60722 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcf4Q60722 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcf4Q60722 Asic1-205ENSMUST00000228185 1818 ntBASIC16.3■□□□□ 0.2
Tcf4Q60722 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcf4Q60722 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Tcf4Q60722 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcf4Q60722 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcf4Q60722 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcf4Q60722 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.3■□□□□ 0.2
Tcf4Q60722 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tcf4Q60722 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tcf4Q60722 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tcf4Q60722 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Tcf4Q60722 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tcf4Q60722 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tcf4Q60722 Gm12895-201ENSMUST00000122214 226 ntBASIC16.29■□□□□ 0.2
Tcf4Q60722 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tcf4Q60722 Gm17807-201ENSMUST00000186869 298 ntBASIC16.29■□□□□ 0.2
Tcf4Q60722 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.29■□□□□ 0.2
Tcf4Q60722 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tcf4Q60722 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms