Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.26■□□□□ 0.35
Ccdc85aQ5SP85 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc85aQ5SP85 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc85aQ5SP85 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc85aQ5SP85 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Ccdc85aQ5SP85 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc85aQ5SP85 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc85aQ5SP85 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.26■□□□□ 0.35
Ccdc85aQ5SP85 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc85aQ5SP85 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.26■□□□□ 0.35
Ccdc85aQ5SP85 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ccdc85aQ5SP85 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Ccdc85aQ5SP85 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc85aQ5SP85 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.26■□□□□ 0.35
Ccdc85aQ5SP85 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc85aQ5SP85 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc85aQ5SP85 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc85aQ5SP85 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc85aQ5SP85 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC17.25■□□□□ 0.35
Ccdc85aQ5SP85 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc85aQ5SP85 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc85aQ5SP85 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc85aQ5SP85 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc85aQ5SP85 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.25■□□□□ 0.35
Ccdc85aQ5SP85 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc85aQ5SP85 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc85aQ5SP85 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc85aQ5SP85 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ccdc85aQ5SP85 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC17.25■□□□□ 0.35
Ccdc85aQ5SP85 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17.25■□□□□ 0.35
Ccdc85aQ5SP85 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.25■□□□□ 0.35
Ccdc85aQ5SP85 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc85aQ5SP85 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ccdc85aQ5SP85 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.25■□□□□ 0.35
Ccdc85aQ5SP85 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ccdc85aQ5SP85 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc85aQ5SP85 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc85aQ5SP85 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Ccdc85aQ5SP85 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc85aQ5SP85 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc85aQ5SP85 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc85aQ5SP85 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc85aQ5SP85 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc85aQ5SP85 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc85aQ5SP85 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc85aQ5SP85 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Ccdc85aQ5SP85 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc85aQ5SP85 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc85aQ5SP85 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc85aQ5SP85 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc85aQ5SP85 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.24■□□□□ 0.35
Ccdc85aQ5SP85 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.24■□□□□ 0.35
Ccdc85aQ5SP85 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Ccdc85aQ5SP85 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc85aQ5SP85 Gm27430-201ENSMUST00000184585 107 ntBASIC17.24■□□□□ 0.35
Ccdc85aQ5SP85 Gm44333-201ENSMUST00000197168 107 ntBASIC17.24■□□□□ 0.35
Ccdc85aQ5SP85 Gm43438-201ENSMUST00000198133 379 ntBASIC17.24■□□□□ 0.35
Ccdc85aQ5SP85 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc85aQ5SP85 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc85aQ5SP85 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc85aQ5SP85 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.24■□□□□ 0.35
Ccdc85aQ5SP85 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc85aQ5SP85 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc85aQ5SP85 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ccdc85aQ5SP85 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.23■□□□□ 0.35
Ccdc85aQ5SP85 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc85aQ5SP85 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Ccdc85aQ5SP85 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc85aQ5SP85 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc85aQ5SP85 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ccdc85aQ5SP85 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ccdc85aQ5SP85 Gm9385-201ENSMUST00000117563 472 ntBASIC17.23■□□□□ 0.35
Ccdc85aQ5SP85 Gm12428-201ENSMUST00000119844 727 ntBASIC17.23■□□□□ 0.35
Ccdc85aQ5SP85 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.23■□□□□ 0.35
Ccdc85aQ5SP85 Gm27622-201ENSMUST00000183779 60 ntBASIC17.23■□□□□ 0.35
Ccdc85aQ5SP85 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc85aQ5SP85 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc85aQ5SP85 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ccdc85aQ5SP85 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ccdc85aQ5SP85 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc85aQ5SP85 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Ccdc85aQ5SP85 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc85aQ5SP85 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ccdc85aQ5SP85 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc85aQ5SP85 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ccdc85aQ5SP85 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc85aQ5SP85 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc85aQ5SP85 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc85aQ5SP85 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc85aQ5SP85 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.22■□□□□ 0.35
Ccdc85aQ5SP85 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.22■□□□□ 0.35
Ccdc85aQ5SP85 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc85aQ5SP85 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc85aQ5SP85 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc85aQ5SP85 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Ccdc85aQ5SP85 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc85aQ5SP85 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc85aQ5SP85 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc85aQ5SP85 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc85aQ5SP85 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms