Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.91■□□□□ 0.46
Ccdc88aQ5SNZ0 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc88aQ5SNZ0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc88aQ5SNZ0 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc88aQ5SNZ0 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc88aQ5SNZ0 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.91■□□□□ 0.46
Ccdc88aQ5SNZ0 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc88aQ5SNZ0 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Ccdc88aQ5SNZ0 Gm17271-201ENSMUST00000165535 355 ntBASIC17.9■□□□□ 0.46
Ccdc88aQ5SNZ0 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.9■□□□□ 0.46
Ccdc88aQ5SNZ0 Gm45167-201ENSMUST00000208007 322 ntBASIC17.9■□□□□ 0.46
Ccdc88aQ5SNZ0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc88aQ5SNZ0 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc88aQ5SNZ0 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc88aQ5SNZ0 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc88aQ5SNZ0 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.9■□□□□ 0.46
Ccdc88aQ5SNZ0 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc88aQ5SNZ0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc88aQ5SNZ0 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ccdc88aQ5SNZ0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.9■□□□□ 0.46
Ccdc88aQ5SNZ0 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc88aQ5SNZ0 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc88aQ5SNZ0 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Ccdc88aQ5SNZ0 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC17.9■□□□□ 0.46
Ccdc88aQ5SNZ0 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.9■□□□□ 0.46
Ccdc88aQ5SNZ0 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC17.9■□□□□ 0.46
Ccdc88aQ5SNZ0 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc88aQ5SNZ0 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Ccdc88aQ5SNZ0 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Ccdc88aQ5SNZ0 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.89■□□□□ 0.46
Ccdc88aQ5SNZ0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ccdc88aQ5SNZ0 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.46
Ccdc88aQ5SNZ0 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ccdc88aQ5SNZ0 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.89■□□□□ 0.45
Ccdc88aQ5SNZ0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc88aQ5SNZ0 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Ccdc88aQ5SNZ0 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc88aQ5SNZ0 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc88aQ5SNZ0 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.89■□□□□ 0.45
Ccdc88aQ5SNZ0 Gm45612-201ENSMUST00000211320 160 ntBASIC17.89■□□□□ 0.45
Ccdc88aQ5SNZ0 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc88aQ5SNZ0 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ccdc88aQ5SNZ0 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc88aQ5SNZ0 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc88aQ5SNZ0 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Ccdc88aQ5SNZ0 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc88aQ5SNZ0 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.89■□□□□ 0.45
Ccdc88aQ5SNZ0 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc88aQ5SNZ0 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc88aQ5SNZ0 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Ccdc88aQ5SNZ0 Gm5177-201ENSMUST00000183092 997 ntBASIC17.88■□□□□ 0.45
Ccdc88aQ5SNZ0 Gm7787-201ENSMUST00000216858 688 ntBASIC17.88■□□□□ 0.45
Ccdc88aQ5SNZ0 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc88aQ5SNZ0 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc88aQ5SNZ0 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc88aQ5SNZ0 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc88aQ5SNZ0 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc88aQ5SNZ0 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc88aQ5SNZ0 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc88aQ5SNZ0 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.88■□□□□ 0.45
Ccdc88aQ5SNZ0 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Ccdc88aQ5SNZ0 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.88■□□□□ 0.45
Ccdc88aQ5SNZ0 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC17.88■□□□□ 0.45
Ccdc88aQ5SNZ0 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc88aQ5SNZ0 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.88■□□□□ 0.45
Ccdc88aQ5SNZ0 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Ccdc88aQ5SNZ0 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc88aQ5SNZ0 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Ccdc88aQ5SNZ0 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc88aQ5SNZ0 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc88aQ5SNZ0 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Ccdc88aQ5SNZ0 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc88aQ5SNZ0 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc88aQ5SNZ0 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.87■□□□□ 0.45
Ccdc88aQ5SNZ0 Gm43474-201ENSMUST00000196415 774 ntBASIC17.87■□□□□ 0.45
Ccdc88aQ5SNZ0 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Ccdc88aQ5SNZ0 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Ccdc88aQ5SNZ0 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.87■□□□□ 0.45
Ccdc88aQ5SNZ0 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc88aQ5SNZ0 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc88aQ5SNZ0 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.86■□□□□ 0.45
Ccdc88aQ5SNZ0 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17.86■□□□□ 0.45
Ccdc88aQ5SNZ0 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC17.86■□□□□ 0.45
Ccdc88aQ5SNZ0 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.86■□□□□ 0.45
Ccdc88aQ5SNZ0 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc88aQ5SNZ0 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Ccdc88aQ5SNZ0 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc88aQ5SNZ0 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc88aQ5SNZ0 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc88aQ5SNZ0 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc88aQ5SNZ0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc88aQ5SNZ0 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc88aQ5SNZ0 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc88aQ5SNZ0 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC17.86■□□□□ 0.45
Ccdc88aQ5SNZ0 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc88aQ5SNZ0 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC17.86■□□□□ 0.45
Ccdc88aQ5SNZ0 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc88aQ5SNZ0 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc88aQ5SNZ0 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc88aQ5SNZ0 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms