Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav2Q5R1I9 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav2Q5R1I9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav2Q5R1I9 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trav2Q5R1I9 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trav2Q5R1I9 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav2Q5R1I9 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav2Q5R1I9 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav2Q5R1I9 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav2Q5R1I9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trav2Q5R1I9 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Trav2Q5R1I9 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Trav2Q5R1I9 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav2Q5R1I9 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav2Q5R1I9 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav2Q5R1I9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav2Q5R1I9 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav2Q5R1I9 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav2Q5R1I9 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav2Q5R1I9 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav2Q5R1I9 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav2Q5R1I9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trav2Q5R1I9 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav2Q5R1I9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav2Q5R1I9 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC12.51□□□□□ -0.41
Trav2Q5R1I9 Gm1401-201ENSMUST00000122048 772 ntBASIC12.51□□□□□ -0.41
Trav2Q5R1I9 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav2Q5R1I9 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav2Q5R1I9 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav2Q5R1I9 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav2Q5R1I9 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav2Q5R1I9 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trav2Q5R1I9 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav2Q5R1I9 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav2Q5R1I9 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav2Q5R1I9 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav2Q5R1I9 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav2Q5R1I9 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav2Q5R1I9 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav2Q5R1I9 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav2Q5R1I9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav2Q5R1I9 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav2Q5R1I9 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav2Q5R1I9 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav2Q5R1I9 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav2Q5R1I9 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav2Q5R1I9 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav2Q5R1I9 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.51□□□□□ -0.41
Trav2Q5R1I9 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav2Q5R1I9 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav2Q5R1I9 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav2Q5R1I9 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav2Q5R1I9 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav2Q5R1I9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Trav2Q5R1I9 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav2Q5R1I9 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Trav2Q5R1I9 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav2Q5R1I9 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav2Q5R1I9 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav2Q5R1I9 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trav2Q5R1I9 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav2Q5R1I9 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Trav2Q5R1I9 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.5□□□□□ -0.41
Trav2Q5R1I9 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.5□□□□□ -0.41
Trav2Q5R1I9 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav2Q5R1I9 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.5□□□□□ -0.41
Trav2Q5R1I9 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav2Q5R1I9 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.5□□□□□ -0.41
Trav2Q5R1I9 AW822252-206ENSMUST00000208904 237 ntBASIC12.5□□□□□ -0.41
Trav2Q5R1I9 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav2Q5R1I9 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav2Q5R1I9 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav2Q5R1I9 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Trav2Q5R1I9 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav2Q5R1I9 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav2Q5R1I9 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav2Q5R1I9 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trav2Q5R1I9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav2Q5R1I9 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav2Q5R1I9 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC12.5□□□□□ -0.41
Trav2Q5R1I9 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav2Q5R1I9 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav2Q5R1I9 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav2Q5R1I9 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav2Q5R1I9 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav2Q5R1I9 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav2Q5R1I9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trav2Q5R1I9 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav2Q5R1I9 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav2Q5R1I9 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav2Q5R1I9 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Trav2Q5R1I9 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav2Q5R1I9 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav2Q5R1I9 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav2Q5R1I9 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav2Q5R1I9 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav2Q5R1I9 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav2Q5R1I9 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav2Q5R1I9 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav2Q5R1I9 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms