Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-2Q5R1I4 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav6-2Q5R1I4 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.74□□□□□ -0.21
Trav6-2Q5R1I4 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.74□□□□□ -0.21
Trav6-2Q5R1I4 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.74□□□□□ -0.21
Trav6-2Q5R1I4 Gm44492-201ENSMUST00000197012 141 ntBASIC13.74□□□□□ -0.21
Trav6-2Q5R1I4 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav6-2Q5R1I4 Gm15635-204ENSMUST00000208024 2539 ntBASIC13.74□□□□□ -0.21
Trav6-2Q5R1I4 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Trav6-2Q5R1I4 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-2Q5R1I4 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-2Q5R1I4 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trav6-2Q5R1I4 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-2Q5R1I4 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Trav6-2Q5R1I4 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-2Q5R1I4 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-2Q5R1I4 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-2Q5R1I4 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-2Q5R1I4 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trav6-2Q5R1I4 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-2Q5R1I4 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-2Q5R1I4 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-2Q5R1I4 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav6-2Q5R1I4 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav6-2Q5R1I4 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Trav6-2Q5R1I4 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-2Q5R1I4 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-2Q5R1I4 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-2Q5R1I4 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-2Q5R1I4 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-2Q5R1I4 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.73□□□□□ -0.21
Trav6-2Q5R1I4 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Trav6-2Q5R1I4 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-2Q5R1I4 Chchd1-203ENSMUST00000224633 557 ntBASIC13.73□□□□□ -0.21
Trav6-2Q5R1I4 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-2Q5R1I4 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-2Q5R1I4 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-2Q5R1I4 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-2Q5R1I4 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-2Q5R1I4 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-2Q5R1I4 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Trav6-2Q5R1I4 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-2Q5R1I4 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Trav6-2Q5R1I4 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-2Q5R1I4 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav6-2Q5R1I4 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-2Q5R1I4 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-2Q5R1I4 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav6-2Q5R1I4 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav6-2Q5R1I4 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-2Q5R1I4 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-2Q5R1I4 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-2Q5R1I4 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-2Q5R1I4 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-2Q5R1I4 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-2Q5R1I4 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-2Q5R1I4 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.72□□□□□ -0.21
Trav6-2Q5R1I4 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
Trav6-2Q5R1I4 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav6-2Q5R1I4 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.72□□□□□ -0.21
Trav6-2Q5R1I4 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.72□□□□□ -0.21
Trav6-2Q5R1I4 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Trav6-2Q5R1I4 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-2Q5R1I4 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-2Q5R1I4 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.72□□□□□ -0.21
Trav6-2Q5R1I4 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-2Q5R1I4 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-2Q5R1I4 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-2Q5R1I4 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-2Q5R1I4 Grk6-207ENSMUST00000225925 2769 ntBASIC13.72□□□□□ -0.21
Trav6-2Q5R1I4 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-2Q5R1I4 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-2Q5R1I4 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-2Q5R1I4 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-2Q5R1I4 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trav6-2Q5R1I4 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-2Q5R1I4 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-2Q5R1I4 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-2Q5R1I4 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-2Q5R1I4 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-2Q5R1I4 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-2Q5R1I4 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-2Q5R1I4 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-2Q5R1I4 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-2Q5R1I4 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-2Q5R1I4 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-2Q5R1I4 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.71□□□□□ -0.21
Trav6-2Q5R1I4 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-2Q5R1I4 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.71□□□□□ -0.21
Trav6-2Q5R1I4 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-2Q5R1I4 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-2Q5R1I4 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.71□□□□□ -0.21
Trav6-2Q5R1I4 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-2Q5R1I4 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-2Q5R1I4 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-2Q5R1I4 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-2Q5R1I4 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-2Q5R1I4 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
Trav6-2Q5R1I4 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-2Q5R1I4 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms