Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Rnf43Q5NCP0 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf43Q5NCP0 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf43Q5NCP0 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf43Q5NCP0 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf43Q5NCP0 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf43Q5NCP0 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf43Q5NCP0 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf43Q5NCP0 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Rnf43Q5NCP0 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.91■□□□□ 0.14
Rnf43Q5NCP0 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf43Q5NCP0 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf43Q5NCP0 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf43Q5NCP0 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.91■□□□□ 0.14
Rnf43Q5NCP0 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Rnf43Q5NCP0 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf43Q5NCP0 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf43Q5NCP0 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.91■□□□□ 0.14
Rnf43Q5NCP0 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf43Q5NCP0 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf43Q5NCP0 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf43Q5NCP0 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rnf43Q5NCP0 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf43Q5NCP0 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf43Q5NCP0 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf43Q5NCP0 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Rnf43Q5NCP0 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf43Q5NCP0 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf43Q5NCP0 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf43Q5NCP0 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.9■□□□□ 0.14
Rnf43Q5NCP0 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf43Q5NCP0 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Rnf43Q5NCP0 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC15.9■□□□□ 0.14
Rnf43Q5NCP0 Gm19164-201ENSMUST00000210667 640 ntBASIC15.9■□□□□ 0.14
Rnf43Q5NCP0 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.9■□□□□ 0.14
Rnf43Q5NCP0 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf43Q5NCP0 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Rnf43Q5NCP0 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf43Q5NCP0 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf43Q5NCP0 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf43Q5NCP0 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Rnf43Q5NCP0 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf43Q5NCP0 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf43Q5NCP0 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf43Q5NCP0 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf43Q5NCP0 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf43Q5NCP0 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.9■□□□□ 0.14
Rnf43Q5NCP0 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rnf43Q5NCP0 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.14
Rnf43Q5NCP0 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf43Q5NCP0 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf43Q5NCP0 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf43Q5NCP0 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Rnf43Q5NCP0 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.89■□□□□ 0.13
Rnf43Q5NCP0 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Rnf43Q5NCP0 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf43Q5NCP0 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf43Q5NCP0 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
Rnf43Q5NCP0 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf43Q5NCP0 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.89■□□□□ 0.13
Rnf43Q5NCP0 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf43Q5NCP0 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf43Q5NCP0 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.89■□□□□ 0.13
Rnf43Q5NCP0 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.89■□□□□ 0.13
Rnf43Q5NCP0 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf43Q5NCP0 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
Rnf43Q5NCP0 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf43Q5NCP0 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Rnf43Q5NCP0 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf43Q5NCP0 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf43Q5NCP0 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf43Q5NCP0 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf43Q5NCP0 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.89■□□□□ 0.13
Rnf43Q5NCP0 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf43Q5NCP0 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf43Q5NCP0 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rnf43Q5NCP0 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf43Q5NCP0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf43Q5NCP0 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf43Q5NCP0 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Rnf43Q5NCP0 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf43Q5NCP0 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.88■□□□□ 0.13
Rnf43Q5NCP0 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf43Q5NCP0 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf43Q5NCP0 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf43Q5NCP0 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.88■□□□□ 0.13
Rnf43Q5NCP0 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf43Q5NCP0 Mir6956-201ENSMUST00000183598 62 ntBASIC15.88■□□□□ 0.13
Rnf43Q5NCP0 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.88■□□□□ 0.13
Rnf43Q5NCP0 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf43Q5NCP0 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf43Q5NCP0 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Rnf43Q5NCP0 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf43Q5NCP0 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf43Q5NCP0 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf43Q5NCP0 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf43Q5NCP0 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf43Q5NCP0 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf43Q5NCP0 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rnf43Q5NCP0 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms