Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf20Q5DTM8 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf20Q5DTM8 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.66■□□□□ 0.58
Rnf20Q5DTM8 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf20Q5DTM8 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf20Q5DTM8 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf20Q5DTM8 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.66■□□□□ 0.58
Rnf20Q5DTM8 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf20Q5DTM8 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Rnf20Q5DTM8 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf20Q5DTM8 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf20Q5DTM8 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Rnf20Q5DTM8 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Rnf20Q5DTM8 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.66■□□□□ 0.58
Rnf20Q5DTM8 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf20Q5DTM8 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf20Q5DTM8 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf20Q5DTM8 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
Rnf20Q5DTM8 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.66■□□□□ 0.58
Rnf20Q5DTM8 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf20Q5DTM8 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf20Q5DTM8 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.65■□□□□ 0.58
Rnf20Q5DTM8 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Rnf20Q5DTM8 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf20Q5DTM8 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf20Q5DTM8 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf20Q5DTM8 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf20Q5DTM8 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf20Q5DTM8 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf20Q5DTM8 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf20Q5DTM8 Gm12895-201ENSMUST00000122214 226 ntBASIC18.65■□□□□ 0.58
Rnf20Q5DTM8 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf20Q5DTM8 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.65■□□□□ 0.58
Rnf20Q5DTM8 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf20Q5DTM8 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Rnf20Q5DTM8 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf20Q5DTM8 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Rnf20Q5DTM8 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf20Q5DTM8 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf20Q5DTM8 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf20Q5DTM8 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf20Q5DTM8 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf20Q5DTM8 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.64■□□□□ 0.58
Rnf20Q5DTM8 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Rnf20Q5DTM8 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rnf20Q5DTM8 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rnf20Q5DTM8 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf20Q5DTM8 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf20Q5DTM8 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf20Q5DTM8 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf20Q5DTM8 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Rnf20Q5DTM8 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.64■□□□□ 0.57
Rnf20Q5DTM8 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf20Q5DTM8 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf20Q5DTM8 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf20Q5DTM8 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf20Q5DTM8 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf20Q5DTM8 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf20Q5DTM8 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Rnf20Q5DTM8 Gm7669-201ENSMUST00000210184 1603 ntBASIC18.63■□□□□ 0.57
Rnf20Q5DTM8 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf20Q5DTM8 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf20Q5DTM8 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf20Q5DTM8 Gm12497-201ENSMUST00000138778 237 ntBASIC18.63■□□□□ 0.57
Rnf20Q5DTM8 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf20Q5DTM8 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf20Q5DTM8 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf20Q5DTM8 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf20Q5DTM8 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf20Q5DTM8 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf20Q5DTM8 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf20Q5DTM8 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf20Q5DTM8 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf20Q5DTM8 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.63■□□□□ 0.57
Rnf20Q5DTM8 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf20Q5DTM8 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf20Q5DTM8 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Rnf20Q5DTM8 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf20Q5DTM8 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf20Q5DTM8 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf20Q5DTM8 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Rnf20Q5DTM8 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
Rnf20Q5DTM8 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf20Q5DTM8 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Rnf20Q5DTM8 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf20Q5DTM8 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.62■□□□□ 0.57
Rnf20Q5DTM8 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.62■□□□□ 0.57
Rnf20Q5DTM8 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.62■□□□□ 0.57
Rnf20Q5DTM8 Gm18669-201ENSMUST00000216049 778 ntBASIC18.62■□□□□ 0.57
Rnf20Q5DTM8 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf20Q5DTM8 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf20Q5DTM8 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Rnf20Q5DTM8 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf20Q5DTM8 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf20Q5DTM8 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf20Q5DTM8 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf20Q5DTM8 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf20Q5DTM8 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf20Q5DTM8 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf20Q5DTM8 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms