Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
Rc3h1Q4VGL6 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.08■□□□□ 0.48
Rc3h1Q4VGL6 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rc3h1Q4VGL6 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rc3h1Q4VGL6 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rc3h1Q4VGL6 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rc3h1Q4VGL6 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rc3h1Q4VGL6 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.08■□□□□ 0.48
Rc3h1Q4VGL6 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rc3h1Q4VGL6 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rc3h1Q4VGL6 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rc3h1Q4VGL6 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rc3h1Q4VGL6 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.08■□□□□ 0.48
Rc3h1Q4VGL6 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rc3h1Q4VGL6 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Rc3h1Q4VGL6 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rc3h1Q4VGL6 Prkcz2-201ENSMUST00000206136 1756 ntBASIC18.07■□□□□ 0.48
Rc3h1Q4VGL6 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rc3h1Q4VGL6 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rc3h1Q4VGL6 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rc3h1Q4VGL6 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rc3h1Q4VGL6 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rc3h1Q4VGL6 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.07■□□□□ 0.48
Rc3h1Q4VGL6 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.07■□□□□ 0.48
Rc3h1Q4VGL6 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.07■□□□□ 0.48
Rc3h1Q4VGL6 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rc3h1Q4VGL6 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rc3h1Q4VGL6 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Rc3h1Q4VGL6 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rc3h1Q4VGL6 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rc3h1Q4VGL6 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rc3h1Q4VGL6 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Rc3h1Q4VGL6 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rc3h1Q4VGL6 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rc3h1Q4VGL6 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rc3h1Q4VGL6 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rc3h1Q4VGL6 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rc3h1Q4VGL6 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rc3h1Q4VGL6 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rc3h1Q4VGL6 Gm7669-201ENSMUST00000210184 1603 ntBASIC18.06■□□□□ 0.48
Rc3h1Q4VGL6 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rc3h1Q4VGL6 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rc3h1Q4VGL6 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC18.06■□□□□ 0.48
Rc3h1Q4VGL6 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.06■□□□□ 0.48
Rc3h1Q4VGL6 Gm18489-201ENSMUST00000172565 551 ntBASIC18.06■□□□□ 0.48
Rc3h1Q4VGL6 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC18.06■□□□□ 0.48
Rc3h1Q4VGL6 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Rc3h1Q4VGL6 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.06■□□□□ 0.48
Rc3h1Q4VGL6 Gm43073-201ENSMUST00000198200 1189 ntBASIC18.06■□□□□ 0.48
Rc3h1Q4VGL6 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.06■□□□□ 0.48
Rc3h1Q4VGL6 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rc3h1Q4VGL6 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rc3h1Q4VGL6 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rc3h1Q4VGL6 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.06■□□□□ 0.48
Rc3h1Q4VGL6 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.06■□□□□ 0.48
Rc3h1Q4VGL6 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rc3h1Q4VGL6 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rc3h1Q4VGL6 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rc3h1Q4VGL6 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.05■□□□□ 0.48
Rc3h1Q4VGL6 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Rc3h1Q4VGL6 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rc3h1Q4VGL6 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rc3h1Q4VGL6 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rc3h1Q4VGL6 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.05■□□□□ 0.48
Rc3h1Q4VGL6 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rc3h1Q4VGL6 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Rc3h1Q4VGL6 Gm13597-201ENSMUST00000121239 375 ntBASIC18.05■□□□□ 0.48
Rc3h1Q4VGL6 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rc3h1Q4VGL6 Gm7229-201ENSMUST00000214719 1007 ntBASIC18.05■□□□□ 0.48
Rc3h1Q4VGL6 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.05■□□□□ 0.48
Rc3h1Q4VGL6 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Rc3h1Q4VGL6 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rc3h1Q4VGL6 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rc3h1Q4VGL6 Gm10175-201ENSMUST00000086013 645 ntBASIC18.05■□□□□ 0.48
Rc3h1Q4VGL6 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rc3h1Q4VGL6 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Rc3h1Q4VGL6 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rc3h1Q4VGL6 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rc3h1Q4VGL6 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rc3h1Q4VGL6 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rc3h1Q4VGL6 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.05■□□□□ 0.48
Rc3h1Q4VGL6 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Rc3h1Q4VGL6 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rc3h1Q4VGL6 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rc3h1Q4VGL6 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rc3h1Q4VGL6 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rc3h1Q4VGL6 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rc3h1Q4VGL6 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rc3h1Q4VGL6 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rc3h1Q4VGL6 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rc3h1Q4VGL6 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rc3h1Q4VGL6 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.04■□□□□ 0.48
Rc3h1Q4VGL6 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rc3h1Q4VGL6 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rc3h1Q4VGL6 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rc3h1Q4VGL6 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rc3h1Q4VGL6 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC18.04■□□□□ 0.48
Rc3h1Q4VGL6 Gm25911-201ENSMUST00000157621 56 ntBASIC18.04■□□□□ 0.48
Rc3h1Q4VGL6 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.04■□□□□ 0.48
Rc3h1Q4VGL6 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms