Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Syne3Q4FZC9 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Syne3Q4FZC9 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Syne3Q4FZC9 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Syne3Q4FZC9 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Syne3Q4FZC9 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syne3Q4FZC9 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syne3Q4FZC9 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syne3Q4FZC9 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Syne3Q4FZC9 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Syne3Q4FZC9 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syne3Q4FZC9 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.65■□□□□ 0.26
Syne3Q4FZC9 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syne3Q4FZC9 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syne3Q4FZC9 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syne3Q4FZC9 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Syne3Q4FZC9 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syne3Q4FZC9 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.65■□□□□ 0.26
Syne3Q4FZC9 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syne3Q4FZC9 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syne3Q4FZC9 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Syne3Q4FZC9 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Syne3Q4FZC9 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syne3Q4FZC9 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syne3Q4FZC9 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.65■□□□□ 0.26
Syne3Q4FZC9 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syne3Q4FZC9 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syne3Q4FZC9 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syne3Q4FZC9 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syne3Q4FZC9 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syne3Q4FZC9 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Syne3Q4FZC9 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Syne3Q4FZC9 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.64■□□□□ 0.25
Syne3Q4FZC9 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Syne3Q4FZC9 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Syne3Q4FZC9 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syne3Q4FZC9 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syne3Q4FZC9 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syne3Q4FZC9 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Syne3Q4FZC9 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syne3Q4FZC9 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syne3Q4FZC9 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syne3Q4FZC9 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.64■□□□□ 0.25
Syne3Q4FZC9 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.64■□□□□ 0.25
Syne3Q4FZC9 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Syne3Q4FZC9 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syne3Q4FZC9 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syne3Q4FZC9 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syne3Q4FZC9 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syne3Q4FZC9 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syne3Q4FZC9 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syne3Q4FZC9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Syne3Q4FZC9 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Syne3Q4FZC9 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syne3Q4FZC9 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Syne3Q4FZC9 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.63■□□□□ 0.25
Syne3Q4FZC9 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Syne3Q4FZC9 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Syne3Q4FZC9 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Syne3Q4FZC9 Gm28033-201ENSMUST00000184224 96 ntBASIC16.63■□□□□ 0.25
Syne3Q4FZC9 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.63■□□□□ 0.25
Syne3Q4FZC9 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Syne3Q4FZC9 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.63■□□□□ 0.25
Syne3Q4FZC9 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syne3Q4FZC9 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Syne3Q4FZC9 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syne3Q4FZC9 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Syne3Q4FZC9 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Syne3Q4FZC9 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syne3Q4FZC9 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Syne3Q4FZC9 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syne3Q4FZC9 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syne3Q4FZC9 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syne3Q4FZC9 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Syne3Q4FZC9 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syne3Q4FZC9 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.63■□□□□ 0.25
Syne3Q4FZC9 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Syne3Q4FZC9 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Syne3Q4FZC9 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Syne3Q4FZC9 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syne3Q4FZC9 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syne3Q4FZC9 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Syne3Q4FZC9 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Syne3Q4FZC9 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Syne3Q4FZC9 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Syne3Q4FZC9 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Syne3Q4FZC9 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Syne3Q4FZC9 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Syne3Q4FZC9 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Syne3Q4FZC9 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Syne3Q4FZC9 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Syne3Q4FZC9 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Syne3Q4FZC9 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Syne3Q4FZC9 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Syne3Q4FZC9 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Syne3Q4FZC9 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Syne3Q4FZC9 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Syne3Q4FZC9 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.62■□□□□ 0.25
Syne3Q4FZC9 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Syne3Q4FZC9 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms