Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf38aQ4FK66 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf38aQ4FK66 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf38aQ4FK66 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf38aQ4FK66 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf38aQ4FK66 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf38aQ4FK66 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf38aQ4FK66 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf38aQ4FK66 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf38aQ4FK66 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Prpf38aQ4FK66 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Prpf38aQ4FK66 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.25■□□□□ 0.51
Prpf38aQ4FK66 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Prpf38aQ4FK66 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf38aQ4FK66 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf38aQ4FK66 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Prpf38aQ4FK66 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf38aQ4FK66 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf38aQ4FK66 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf38aQ4FK66 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Prpf38aQ4FK66 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf38aQ4FK66 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC18.25■□□□□ 0.51
Prpf38aQ4FK66 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf38aQ4FK66 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf38aQ4FK66 Mir8117-201ENSMUST00000184773 107 ntBASIC18.25■□□□□ 0.51
Prpf38aQ4FK66 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf38aQ4FK66 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf38aQ4FK66 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf38aQ4FK66 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf38aQ4FK66 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf38aQ4FK66 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf38aQ4FK66 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf38aQ4FK66 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf38aQ4FK66 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Prpf38aQ4FK66 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC18.25■□□□□ 0.51
Prpf38aQ4FK66 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Prpf38aQ4FK66 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf38aQ4FK66 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf38aQ4FK66 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf38aQ4FK66 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.24■□□□□ 0.51
Prpf38aQ4FK66 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.24■□□□□ 0.51
Prpf38aQ4FK66 Gm4995-201ENSMUST00000117247 432 ntBASIC18.24■□□□□ 0.51
Prpf38aQ4FK66 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf38aQ4FK66 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf38aQ4FK66 Gm7286-201ENSMUST00000182691 1007 ntBASIC18.24■□□□□ 0.51
Prpf38aQ4FK66 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.24■□□□□ 0.51
Prpf38aQ4FK66 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.24■□□□□ 0.51
Prpf38aQ4FK66 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.24■□□□□ 0.51
Prpf38aQ4FK66 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf38aQ4FK66 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf38aQ4FK66 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf38aQ4FK66 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf38aQ4FK66 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf38aQ4FK66 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf38aQ4FK66 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf38aQ4FK66 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf38aQ4FK66 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Prpf38aQ4FK66 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf38aQ4FK66 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.24■□□□□ 0.51
Prpf38aQ4FK66 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Prpf38aQ4FK66 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf38aQ4FK66 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Prpf38aQ4FK66 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf38aQ4FK66 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf38aQ4FK66 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf38aQ4FK66 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf38aQ4FK66 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.23■□□□□ 0.51
Prpf38aQ4FK66 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf38aQ4FK66 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf38aQ4FK66 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Prpf38aQ4FK66 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf38aQ4FK66 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf38aQ4FK66 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Prpf38aQ4FK66 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.23■□□□□ 0.51
Prpf38aQ4FK66 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf38aQ4FK66 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Prpf38aQ4FK66 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf38aQ4FK66 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf38aQ4FK66 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf38aQ4FK66 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf38aQ4FK66 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.23■□□□□ 0.51
Prpf38aQ4FK66 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
Prpf38aQ4FK66 Mir3113-201ENSMUST00000175478 76 ntBASIC18.23■□□□□ 0.51
Prpf38aQ4FK66 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf38aQ4FK66 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Prpf38aQ4FK66 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf38aQ4FK66 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf38aQ4FK66 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf38aQ4FK66 Gm7669-201ENSMUST00000210184 1603 ntBASIC18.23■□□□□ 0.51
Prpf38aQ4FK66 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf38aQ4FK66 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf38aQ4FK66 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf38aQ4FK66 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf38aQ4FK66 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Prpf38aQ4FK66 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.22■□□□□ 0.51
Prpf38aQ4FK66 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Prpf38aQ4FK66 Prkcz2-201ENSMUST00000206136 1756 ntBASIC18.22■□□□□ 0.51
Prpf38aQ4FK66 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf38aQ4FK66 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Prpf38aQ4FK66 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms