Protein–RNA interactions for Protein: Q3V0M8

BC051142, Testis specific basic protein, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC051142Q3V0M8 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BC051142Q3V0M8 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
BC051142Q3V0M8 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.77■□□□□ 0.28
BC051142Q3V0M8 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
BC051142Q3V0M8 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BC051142Q3V0M8 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
BC051142Q3V0M8 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BC051142Q3V0M8 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BC051142Q3V0M8 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
BC051142Q3V0M8 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
BC051142Q3V0M8 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BC051142Q3V0M8 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BC051142Q3V0M8 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
BC051142Q3V0M8 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.77■□□□□ 0.27
BC051142Q3V0M8 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
BC051142Q3V0M8 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
BC051142Q3V0M8 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BC051142Q3V0M8 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BC051142Q3V0M8 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BC051142Q3V0M8 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.76■□□□□ 0.27
BC051142Q3V0M8 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.76■□□□□ 0.27
BC051142Q3V0M8 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
BC051142Q3V0M8 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.76■□□□□ 0.27
BC051142Q3V0M8 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
BC051142Q3V0M8 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.76■□□□□ 0.27
BC051142Q3V0M8 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.76■□□□□ 0.27
BC051142Q3V0M8 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BC051142Q3V0M8 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BC051142Q3V0M8 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BC051142Q3V0M8 Gm27867-201ENSMUST00000184778 125 ntBASIC16.76■□□□□ 0.27
BC051142Q3V0M8 Gm44454-201ENSMUST00000198541 138 ntBASIC16.76■□□□□ 0.27
BC051142Q3V0M8 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BC051142Q3V0M8 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
BC051142Q3V0M8 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BC051142Q3V0M8 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
BC051142Q3V0M8 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BC051142Q3V0M8 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BC051142Q3V0M8 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BC051142Q3V0M8 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BC051142Q3V0M8 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
BC051142Q3V0M8 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
BC051142Q3V0M8 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BC051142Q3V0M8 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
BC051142Q3V0M8 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.76■□□□□ 0.27
BC051142Q3V0M8 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BC051142Q3V0M8 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BC051142Q3V0M8 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BC051142Q3V0M8 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
BC051142Q3V0M8 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BC051142Q3V0M8 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BC051142Q3V0M8 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
BC051142Q3V0M8 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BC051142Q3V0M8 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BC051142Q3V0M8 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BC051142Q3V0M8 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
BC051142Q3V0M8 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
BC051142Q3V0M8 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BC051142Q3V0M8 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.75■□□□□ 0.27
BC051142Q3V0M8 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
BC051142Q3V0M8 Rprl3-201ENSMUST00000157400 290 ntBASIC16.75■□□□□ 0.27
BC051142Q3V0M8 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.75■□□□□ 0.27
BC051142Q3V0M8 Gm7977-201ENSMUST00000193787 748 ntBASIC16.75■□□□□ 0.27
BC051142Q3V0M8 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.75■□□□□ 0.27
BC051142Q3V0M8 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.75■□□□□ 0.27
BC051142Q3V0M8 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.75■□□□□ 0.27
BC051142Q3V0M8 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BC051142Q3V0M8 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BC051142Q3V0M8 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BC051142Q3V0M8 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BC051142Q3V0M8 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
BC051142Q3V0M8 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BC051142Q3V0M8 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BC051142Q3V0M8 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BC051142Q3V0M8 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BC051142Q3V0M8 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
BC051142Q3V0M8 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BC051142Q3V0M8 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BC051142Q3V0M8 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.74■□□□□ 0.27
BC051142Q3V0M8 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
BC051142Q3V0M8 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BC051142Q3V0M8 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BC051142Q3V0M8 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
BC051142Q3V0M8 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BC051142Q3V0M8 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BC051142Q3V0M8 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BC051142Q3V0M8 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BC051142Q3V0M8 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
BC051142Q3V0M8 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
BC051142Q3V0M8 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BC051142Q3V0M8 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BC051142Q3V0M8 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BC051142Q3V0M8 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
BC051142Q3V0M8 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
BC051142Q3V0M8 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
BC051142Q3V0M8 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
BC051142Q3V0M8 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BC051142Q3V0M8 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
BC051142Q3V0M8 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BC051142Q3V0M8 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BC051142Q3V0M8 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms