Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp48Q3V0C5 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp48Q3V0C5 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Usp48Q3V0C5 Dancr-204ENSMUST00000132389 2347 ntBASIC19.37■□□□□ 0.69
Usp48Q3V0C5 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp48Q3V0C5 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp48Q3V0C5 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp48Q3V0C5 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp48Q3V0C5 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC19.37■□□□□ 0.69
Usp48Q3V0C5 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp48Q3V0C5 Gm11873-201ENSMUST00000117877 1304 ntBASIC19.37■□□□□ 0.69
Usp48Q3V0C5 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Usp48Q3V0C5 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp48Q3V0C5 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp48Q3V0C5 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Usp48Q3V0C5 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC19.37■□□□□ 0.69
Usp48Q3V0C5 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp48Q3V0C5 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp48Q3V0C5 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp48Q3V0C5 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.37■□□□□ 0.69
Usp48Q3V0C5 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp48Q3V0C5 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp48Q3V0C5 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp48Q3V0C5 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp48Q3V0C5 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
Usp48Q3V0C5 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp48Q3V0C5 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp48Q3V0C5 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp48Q3V0C5 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp48Q3V0C5 Gm17271-201ENSMUST00000165535 355 ntBASIC19.36■□□□□ 0.69
Usp48Q3V0C5 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC19.36■□□□□ 0.69
Usp48Q3V0C5 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp48Q3V0C5 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp48Q3V0C5 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp48Q3V0C5 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp48Q3V0C5 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp48Q3V0C5 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Usp48Q3V0C5 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.35■□□□□ 0.69
Usp48Q3V0C5 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp48Q3V0C5 Gm5253-201ENSMUST00000187104 1025 ntBASIC19.35■□□□□ 0.69
Usp48Q3V0C5 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC19.35■□□□□ 0.69
Usp48Q3V0C5 Wdyhv1-206ENSMUST00000227142 786 ntBASIC19.35■□□□□ 0.69
Usp48Q3V0C5 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC19.35■□□□□ 0.69
Usp48Q3V0C5 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Usp48Q3V0C5 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Usp48Q3V0C5 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp48Q3V0C5 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp48Q3V0C5 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Usp48Q3V0C5 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp48Q3V0C5 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Usp48Q3V0C5 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Usp48Q3V0C5 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Usp48Q3V0C5 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.34■□□□□ 0.69
Usp48Q3V0C5 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Usp48Q3V0C5 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp48Q3V0C5 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Usp48Q3V0C5 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp48Q3V0C5 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Usp48Q3V0C5 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC19.34■□□□□ 0.69
Usp48Q3V0C5 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp48Q3V0C5 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Usp48Q3V0C5 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp48Q3V0C5 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Usp48Q3V0C5 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp48Q3V0C5 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp48Q3V0C5 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp48Q3V0C5 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp48Q3V0C5 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp48Q3V0C5 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Usp48Q3V0C5 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp48Q3V0C5 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Usp48Q3V0C5 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp48Q3V0C5 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp48Q3V0C5 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp48Q3V0C5 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Usp48Q3V0C5 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Usp48Q3V0C5 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC19.33■□□□□ 0.68
Usp48Q3V0C5 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC19.33■□□□□ 0.68
Usp48Q3V0C5 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Usp48Q3V0C5 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp48Q3V0C5 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp48Q3V0C5 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Usp48Q3V0C5 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp48Q3V0C5 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp48Q3V0C5 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp48Q3V0C5 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Usp48Q3V0C5 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp48Q3V0C5 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp48Q3V0C5 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp48Q3V0C5 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp48Q3V0C5 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp48Q3V0C5 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp48Q3V0C5 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp48Q3V0C5 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp48Q3V0C5 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp48Q3V0C5 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp48Q3V0C5 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp48Q3V0C5 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Usp48Q3V0C5 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp48Q3V0C5 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms