Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Naf1Q3UMQ8 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Naf1Q3UMQ8 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Naf1Q3UMQ8 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Naf1Q3UMQ8 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Naf1Q3UMQ8 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Naf1Q3UMQ8 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
Naf1Q3UMQ8 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Naf1Q3UMQ8 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Naf1Q3UMQ8 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Naf1Q3UMQ8 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Naf1Q3UMQ8 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Naf1Q3UMQ8 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.92■□□□□ 0.14
Naf1Q3UMQ8 Gm8000-201ENSMUST00000188378 592 ntBASIC15.92■□□□□ 0.14
Naf1Q3UMQ8 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.92■□□□□ 0.14
Naf1Q3UMQ8 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.92■□□□□ 0.14
Naf1Q3UMQ8 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Naf1Q3UMQ8 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Naf1Q3UMQ8 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.92■□□□□ 0.14
Naf1Q3UMQ8 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Naf1Q3UMQ8 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Naf1Q3UMQ8 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Naf1Q3UMQ8 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Naf1Q3UMQ8 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Naf1Q3UMQ8 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Naf1Q3UMQ8 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Naf1Q3UMQ8 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Naf1Q3UMQ8 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.92■□□□□ 0.14
Naf1Q3UMQ8 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Naf1Q3UMQ8 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Naf1Q3UMQ8 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Naf1Q3UMQ8 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Naf1Q3UMQ8 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Naf1Q3UMQ8 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Naf1Q3UMQ8 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Naf1Q3UMQ8 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Naf1Q3UMQ8 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Naf1Q3UMQ8 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
Naf1Q3UMQ8 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Naf1Q3UMQ8 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Naf1Q3UMQ8 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Naf1Q3UMQ8 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Naf1Q3UMQ8 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Naf1Q3UMQ8 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Naf1Q3UMQ8 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Naf1Q3UMQ8 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Naf1Q3UMQ8 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Naf1Q3UMQ8 Gm11764-201ENSMUST00000120221 623 ntBASIC15.91■□□□□ 0.14
Naf1Q3UMQ8 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Naf1Q3UMQ8 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Naf1Q3UMQ8 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Naf1Q3UMQ8 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Naf1Q3UMQ8 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Naf1Q3UMQ8 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Naf1Q3UMQ8 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Naf1Q3UMQ8 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Naf1Q3UMQ8 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Naf1Q3UMQ8 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Naf1Q3UMQ8 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Naf1Q3UMQ8 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Naf1Q3UMQ8 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Naf1Q3UMQ8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Naf1Q3UMQ8 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Naf1Q3UMQ8 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Naf1Q3UMQ8 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Naf1Q3UMQ8 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Naf1Q3UMQ8 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Naf1Q3UMQ8 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Naf1Q3UMQ8 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Naf1Q3UMQ8 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Naf1Q3UMQ8 Gm15358-201ENSMUST00000119249 520 ntBASIC15.9■□□□□ 0.14
Naf1Q3UMQ8 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Naf1Q3UMQ8 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Naf1Q3UMQ8 Gm5264-201ENSMUST00000190584 848 ntBASIC15.9■□□□□ 0.14
Naf1Q3UMQ8 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Naf1Q3UMQ8 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Naf1Q3UMQ8 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Naf1Q3UMQ8 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Naf1Q3UMQ8 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Naf1Q3UMQ8 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Naf1Q3UMQ8 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Naf1Q3UMQ8 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Naf1Q3UMQ8 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Naf1Q3UMQ8 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Naf1Q3UMQ8 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Naf1Q3UMQ8 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Naf1Q3UMQ8 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Naf1Q3UMQ8 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Naf1Q3UMQ8 Grk6-207ENSMUST00000225925 2769 ntBASIC15.89■□□□□ 0.13
Naf1Q3UMQ8 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Naf1Q3UMQ8 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Naf1Q3UMQ8 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Naf1Q3UMQ8 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Naf1Q3UMQ8 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Naf1Q3UMQ8 Gm11594-201ENSMUST00000122313 162 ntBASIC15.89■□□□□ 0.13
Naf1Q3UMQ8 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.89■□□□□ 0.13
Naf1Q3UMQ8 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Naf1Q3UMQ8 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Naf1Q3UMQ8 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Naf1Q3UMQ8 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms