Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43aQ3TL54 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43aQ3TL54 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43aQ3TL54 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43aQ3TL54 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43aQ3TL54 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43aQ3TL54 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43aQ3TL54 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43aQ3TL54 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43aQ3TL54 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43aQ3TL54 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43aQ3TL54 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43aQ3TL54 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.65■□□□□ 0.26
Trim43aQ3TL54 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Trim43aQ3TL54 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.65■□□□□ 0.26
Trim43aQ3TL54 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43aQ3TL54 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43aQ3TL54 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.65■□□□□ 0.26
Trim43aQ3TL54 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43aQ3TL54 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43aQ3TL54 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43aQ3TL54 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trim43aQ3TL54 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43aQ3TL54 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Trim43aQ3TL54 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43aQ3TL54 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43aQ3TL54 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43aQ3TL54 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trim43aQ3TL54 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43aQ3TL54 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
Trim43aQ3TL54 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43aQ3TL54 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43aQ3TL54 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43aQ3TL54 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43aQ3TL54 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43aQ3TL54 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Trim43aQ3TL54 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43aQ3TL54 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Trim43aQ3TL54 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trim43aQ3TL54 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43aQ3TL54 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43aQ3TL54 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43aQ3TL54 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.64■□□□□ 0.25
Trim43aQ3TL54 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43aQ3TL54 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43aQ3TL54 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43aQ3TL54 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Trim43aQ3TL54 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.64■□□□□ 0.25
Trim43aQ3TL54 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43aQ3TL54 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43aQ3TL54 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43aQ3TL54 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trim43aQ3TL54 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.63■□□□□ 0.25
Trim43aQ3TL54 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43aQ3TL54 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43aQ3TL54 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trim43aQ3TL54 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Trim43aQ3TL54 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.63■□□□□ 0.25
Trim43aQ3TL54 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43aQ3TL54 Gm22697-201ENSMUST00000175194 63 ntBASIC16.63■□□□□ 0.25
Trim43aQ3TL54 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43aQ3TL54 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trim43aQ3TL54 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.63■□□□□ 0.25
Trim43aQ3TL54 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.63■□□□□ 0.25
Trim43aQ3TL54 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trim43aQ3TL54 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43aQ3TL54 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43aQ3TL54 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.63■□□□□ 0.25
Trim43aQ3TL54 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43aQ3TL54 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43aQ3TL54 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43aQ3TL54 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43aQ3TL54 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43aQ3TL54 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43aQ3TL54 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43aQ3TL54 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim43aQ3TL54 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim43aQ3TL54 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trim43aQ3TL54 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim43aQ3TL54 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Trim43aQ3TL54 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim43aQ3TL54 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim43aQ3TL54 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim43aQ3TL54 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trim43aQ3TL54 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim43aQ3TL54 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim43aQ3TL54 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim43aQ3TL54 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Trim43aQ3TL54 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim43aQ3TL54 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim43aQ3TL54 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim43aQ3TL54 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim43aQ3TL54 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim43aQ3TL54 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim43aQ3TL54 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim43aQ3TL54 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Trim43aQ3TL54 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim43aQ3TL54 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim43aQ3TL54 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trim43aQ3TL54 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms