Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccbe1Q3MI99 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccbe1Q3MI99 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccbe1Q3MI99 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccbe1Q3MI99 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccbe1Q3MI99 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccbe1Q3MI99 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccbe1Q3MI99 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccbe1Q3MI99 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccbe1Q3MI99 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccbe1Q3MI99 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccbe1Q3MI99 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccbe1Q3MI99 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccbe1Q3MI99 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.21□□□□□ -0.13
Ccbe1Q3MI99 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccbe1Q3MI99 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.21□□□□□ -0.13
Ccbe1Q3MI99 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccbe1Q3MI99 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.21□□□□□ -0.13
Ccbe1Q3MI99 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccbe1Q3MI99 Gm25927-201ENSMUST00000175058 117 ntBASIC14.21□□□□□ -0.13
Ccbe1Q3MI99 Mir6982-201ENSMUST00000184354 68 ntBASIC14.21□□□□□ -0.13
Ccbe1Q3MI99 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Ccbe1Q3MI99 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.21□□□□□ -0.13
Ccbe1Q3MI99 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccbe1Q3MI99 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccbe1Q3MI99 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccbe1Q3MI99 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.21□□□□□ -0.13
Ccbe1Q3MI99 Gm45053-201ENSMUST00000206112 2499 ntBASIC14.21□□□□□ -0.13
Ccbe1Q3MI99 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ccbe1Q3MI99 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccbe1Q3MI99 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccbe1Q3MI99 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccbe1Q3MI99 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Ccbe1Q3MI99 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccbe1Q3MI99 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccbe1Q3MI99 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccbe1Q3MI99 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccbe1Q3MI99 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Ccbe1Q3MI99 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.2□□□□□ -0.14
Ccbe1Q3MI99 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccbe1Q3MI99 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccbe1Q3MI99 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ccbe1Q3MI99 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccbe1Q3MI99 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccbe1Q3MI99 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14.2□□□□□ -0.14
Ccbe1Q3MI99 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.2□□□□□ -0.14
Ccbe1Q3MI99 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccbe1Q3MI99 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccbe1Q3MI99 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccbe1Q3MI99 Mtag2-201ENSMUST00000058665 714 ntBASIC14.2□□□□□ -0.14
Ccbe1Q3MI99 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccbe1Q3MI99 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ccbe1Q3MI99 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.2□□□□□ -0.14
Ccbe1Q3MI99 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ccbe1Q3MI99 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccbe1Q3MI99 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccbe1Q3MI99 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccbe1Q3MI99 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccbe1Q3MI99 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccbe1Q3MI99 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccbe1Q3MI99 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ccbe1Q3MI99 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Ccbe1Q3MI99 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ccbe1Q3MI99 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccbe1Q3MI99 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccbe1Q3MI99 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccbe1Q3MI99 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccbe1Q3MI99 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.19□□□□□ -0.14
Ccbe1Q3MI99 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccbe1Q3MI99 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccbe1Q3MI99 Trmt13-210ENSMUST00000198454 880 ntBASIC14.19□□□□□ -0.14
Ccbe1Q3MI99 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccbe1Q3MI99 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.19□□□□□ -0.14
Ccbe1Q3MI99 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccbe1Q3MI99 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.19□□□□□ -0.14
Ccbe1Q3MI99 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccbe1Q3MI99 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccbe1Q3MI99 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccbe1Q3MI99 Gm43061-201ENSMUST00000198850 2241 ntBASIC14.19□□□□□ -0.14
Ccbe1Q3MI99 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.19□□□□□ -0.14
Ccbe1Q3MI99 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ccbe1Q3MI99 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccbe1Q3MI99 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccbe1Q3MI99 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccbe1Q3MI99 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccbe1Q3MI99 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccbe1Q3MI99 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccbe1Q3MI99 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Ccbe1Q3MI99 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccbe1Q3MI99 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccbe1Q3MI99 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccbe1Q3MI99 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccbe1Q3MI99 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccbe1Q3MI99 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccbe1Q3MI99 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccbe1Q3MI99 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccbe1Q3MI99 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccbe1Q3MI99 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccbe1Q3MI99 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccbe1Q3MI99 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms