Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nhej1Q3KNJ2 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nhej1Q3KNJ2 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nhej1Q3KNJ2 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nhej1Q3KNJ2 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nhej1Q3KNJ2 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nhej1Q3KNJ2 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nhej1Q3KNJ2 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nhej1Q3KNJ2 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nhej1Q3KNJ2 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nhej1Q3KNJ2 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nhej1Q3KNJ2 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nhej1Q3KNJ2 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Nhej1Q3KNJ2 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Nhej1Q3KNJ2 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nhej1Q3KNJ2 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Nhej1Q3KNJ2 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nhej1Q3KNJ2 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nhej1Q3KNJ2 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nhej1Q3KNJ2 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Nhej1Q3KNJ2 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nhej1Q3KNJ2 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Nhej1Q3KNJ2 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nhej1Q3KNJ2 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Nhej1Q3KNJ2 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.72■□□□□ 0.27
Nhej1Q3KNJ2 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nhej1Q3KNJ2 Gm9987-201ENSMUST00000069768 567 ntBASIC16.72■□□□□ 0.27
Nhej1Q3KNJ2 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nhej1Q3KNJ2 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Nhej1Q3KNJ2 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nhej1Q3KNJ2 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nhej1Q3KNJ2 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nhej1Q3KNJ2 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nhej1Q3KNJ2 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nhej1Q3KNJ2 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nhej1Q3KNJ2 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nhej1Q3KNJ2 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nhej1Q3KNJ2 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nhej1Q3KNJ2 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nhej1Q3KNJ2 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.71■□□□□ 0.27
Nhej1Q3KNJ2 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Nhej1Q3KNJ2 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.71■□□□□ 0.27
Nhej1Q3KNJ2 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nhej1Q3KNJ2 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Nhej1Q3KNJ2 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nhej1Q3KNJ2 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.71■□□□□ 0.27
Nhej1Q3KNJ2 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.71■□□□□ 0.27
Nhej1Q3KNJ2 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.71■□□□□ 0.27
Nhej1Q3KNJ2 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nhej1Q3KNJ2 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nhej1Q3KNJ2 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nhej1Q3KNJ2 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nhej1Q3KNJ2 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nhej1Q3KNJ2 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nhej1Q3KNJ2 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nhej1Q3KNJ2 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nhej1Q3KNJ2 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.7■□□□□ 0.26
Nhej1Q3KNJ2 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nhej1Q3KNJ2 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Nhej1Q3KNJ2 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nhej1Q3KNJ2 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Nhej1Q3KNJ2 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nhej1Q3KNJ2 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nhej1Q3KNJ2 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nhej1Q3KNJ2 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nhej1Q3KNJ2 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nhej1Q3KNJ2 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Nhej1Q3KNJ2 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nhej1Q3KNJ2 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Nhej1Q3KNJ2 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nhej1Q3KNJ2 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nhej1Q3KNJ2 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Nhej1Q3KNJ2 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nhej1Q3KNJ2 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nhej1Q3KNJ2 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nhej1Q3KNJ2 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nhej1Q3KNJ2 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Nhej1Q3KNJ2 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nhej1Q3KNJ2 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nhej1Q3KNJ2 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Nhej1Q3KNJ2 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.69■□□□□ 0.26
Nhej1Q3KNJ2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nhej1Q3KNJ2 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nhej1Q3KNJ2 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nhej1Q3KNJ2 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nhej1Q3KNJ2 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nhej1Q3KNJ2 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.69■□□□□ 0.26
Nhej1Q3KNJ2 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nhej1Q3KNJ2 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nhej1Q3KNJ2 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nhej1Q3KNJ2 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nhej1Q3KNJ2 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nhej1Q3KNJ2 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.69■□□□□ 0.26
Nhej1Q3KNJ2 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nhej1Q3KNJ2 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nhej1Q3KNJ2 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nhej1Q3KNJ2 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nhej1Q3KNJ2 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nhej1Q3KNJ2 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nhej1Q3KNJ2 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms