Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Chrna5Q2MKA5 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.58■□□□□ 0.56
Chrna5Q2MKA5 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Chrna5Q2MKA5 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Chrna5Q2MKA5 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Chrna5Q2MKA5 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chrna5Q2MKA5 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chrna5Q2MKA5 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.58■□□□□ 0.56
Chrna5Q2MKA5 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Chrna5Q2MKA5 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Chrna5Q2MKA5 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chrna5Q2MKA5 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chrna5Q2MKA5 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Chrna5Q2MKA5 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Chrna5Q2MKA5 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC18.57■□□□□ 0.56
Chrna5Q2MKA5 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Chrna5Q2MKA5 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chrna5Q2MKA5 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.57■□□□□ 0.56
Chrna5Q2MKA5 AC130669.1-201ENSMUST00000228537 1672 ntBASIC18.57■□□□□ 0.56
Chrna5Q2MKA5 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chrna5Q2MKA5 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chrna5Q2MKA5 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chrna5Q2MKA5 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chrna5Q2MKA5 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chrna5Q2MKA5 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Chrna5Q2MKA5 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chrna5Q2MKA5 Gm12151-201ENSMUST00000121374 290 ntBASIC18.57■□□□□ 0.56
Chrna5Q2MKA5 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC18.57■□□□□ 0.56
Chrna5Q2MKA5 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Chrna5Q2MKA5 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chrna5Q2MKA5 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Chrna5Q2MKA5 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Chrna5Q2MKA5 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chrna5Q2MKA5 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chrna5Q2MKA5 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chrna5Q2MKA5 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chrna5Q2MKA5 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Chrna5Q2MKA5 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chrna5Q2MKA5 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chrna5Q2MKA5 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chrna5Q2MKA5 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chrna5Q2MKA5 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chrna5Q2MKA5 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chrna5Q2MKA5 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chrna5Q2MKA5 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chrna5Q2MKA5 Gm24158-201ENSMUST00000175263 71 ntBASIC18.56■□□□□ 0.56
Chrna5Q2MKA5 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Chrna5Q2MKA5 Gm8318-201ENSMUST00000182954 872 ntBASIC18.56■□□□□ 0.56
Chrna5Q2MKA5 Gm38294-201ENSMUST00000192831 381 ntBASIC18.56■□□□□ 0.56
Chrna5Q2MKA5 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chrna5Q2MKA5 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chrna5Q2MKA5 AC157650.3-201ENSMUST00000225058 1476 ntBASIC18.56■□□□□ 0.56
Chrna5Q2MKA5 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chrna5Q2MKA5 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chrna5Q2MKA5 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Chrna5Q2MKA5 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chrna5Q2MKA5 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chrna5Q2MKA5 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chrna5Q2MKA5 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chrna5Q2MKA5 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chrna5Q2MKA5 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chrna5Q2MKA5 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.55■□□□□ 0.56
Chrna5Q2MKA5 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chrna5Q2MKA5 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.55■□□□□ 0.56
Chrna5Q2MKA5 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chrna5Q2MKA5 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC18.55■□□□□ 0.56
Chrna5Q2MKA5 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chrna5Q2MKA5 Gm13223-201ENSMUST00000118609 747 ntBASIC18.55■□□□□ 0.56
Chrna5Q2MKA5 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Chrna5Q2MKA5 Gm27430-201ENSMUST00000184585 107 ntBASIC18.55■□□□□ 0.56
Chrna5Q2MKA5 Gm44333-201ENSMUST00000197168 107 ntBASIC18.55■□□□□ 0.56
Chrna5Q2MKA5 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Chrna5Q2MKA5 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC18.55■□□□□ 0.56
Chrna5Q2MKA5 CT030684.1-201ENSMUST00000227292 914 ntBASIC18.55■□□□□ 0.56
Chrna5Q2MKA5 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Chrna5Q2MKA5 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chrna5Q2MKA5 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chrna5Q2MKA5 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chrna5Q2MKA5 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chrna5Q2MKA5 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Chrna5Q2MKA5 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.55■□□□□ 0.56
Chrna5Q2MKA5 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chrna5Q2MKA5 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.54■□□□□ 0.56
Chrna5Q2MKA5 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chrna5Q2MKA5 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Chrna5Q2MKA5 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Chrna5Q2MKA5 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Chrna5Q2MKA5 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chrna5Q2MKA5 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chrna5Q2MKA5 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chrna5Q2MKA5 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC18.54■□□□□ 0.56
Chrna5Q2MKA5 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Chrna5Q2MKA5 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
Chrna5Q2MKA5 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chrna5Q2MKA5 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC18.54■□□□□ 0.56
Chrna5Q2MKA5 Gm10499-201ENSMUST00000174094 934 ntBASIC18.54■□□□□ 0.56
Chrna5Q2MKA5 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chrna5Q2MKA5 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Chrna5Q2MKA5 Mir6977-201ENSMUST00000184960 64 ntBASIC18.54■□□□□ 0.56
Chrna5Q2MKA5 Gm43438-201ENSMUST00000198133 379 ntBASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms