Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim72Q1XH17 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Trim72Q1XH17 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.71■□□□□ 0.27
Trim72Q1XH17 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.71■□□□□ 0.27
Trim72Q1XH17 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.71■□□□□ 0.27
Trim72Q1XH17 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.71■□□□□ 0.27
Trim72Q1XH17 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim72Q1XH17 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Trim72Q1XH17 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim72Q1XH17 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim72Q1XH17 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim72Q1XH17 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim72Q1XH17 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim72Q1XH17 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.71■□□□□ 0.27
Trim72Q1XH17 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.26
Trim72Q1XH17 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trim72Q1XH17 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim72Q1XH17 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim72Q1XH17 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim72Q1XH17 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim72Q1XH17 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim72Q1XH17 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim72Q1XH17 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim72Q1XH17 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim72Q1XH17 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim72Q1XH17 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim72Q1XH17 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim72Q1XH17 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.7■□□□□ 0.26
Trim72Q1XH17 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim72Q1XH17 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.7■□□□□ 0.26
Trim72Q1XH17 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trim72Q1XH17 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim72Q1XH17 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim72Q1XH17 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim72Q1XH17 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim72Q1XH17 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim72Q1XH17 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim72Q1XH17 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trim72Q1XH17 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim72Q1XH17 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim72Q1XH17 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim72Q1XH17 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim72Q1XH17 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim72Q1XH17 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim72Q1XH17 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim72Q1XH17 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim72Q1XH17 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim72Q1XH17 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim72Q1XH17 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim72Q1XH17 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim72Q1XH17 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim72Q1XH17 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim72Q1XH17 Gm8097-201ENSMUST00000117903 829 ntBASIC16.69■□□□□ 0.26
Trim72Q1XH17 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim72Q1XH17 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim72Q1XH17 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.69■□□□□ 0.26
Trim72Q1XH17 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim72Q1XH17 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim72Q1XH17 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim72Q1XH17 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.69■□□□□ 0.26
Trim72Q1XH17 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim72Q1XH17 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.69■□□□□ 0.26
Trim72Q1XH17 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.69■□□□□ 0.26
Trim72Q1XH17 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.69■□□□□ 0.26
Trim72Q1XH17 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
Trim72Q1XH17 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.69■□□□□ 0.26
Trim72Q1XH17 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim72Q1XH17 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim72Q1XH17 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim72Q1XH17 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trim72Q1XH17 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim72Q1XH17 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Trim72Q1XH17 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim72Q1XH17 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim72Q1XH17 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim72Q1XH17 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim72Q1XH17 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim72Q1XH17 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim72Q1XH17 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim72Q1XH17 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trim72Q1XH17 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim72Q1XH17 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim72Q1XH17 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim72Q1XH17 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Trim72Q1XH17 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim72Q1XH17 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim72Q1XH17 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trim72Q1XH17 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim72Q1XH17 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Trim72Q1XH17 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim72Q1XH17 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim72Q1XH17 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.68■□□□□ 0.26
Trim72Q1XH17 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.68■□□□□ 0.26
Trim72Q1XH17 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim72Q1XH17 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.68■□□□□ 0.26
Trim72Q1XH17 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trim72Q1XH17 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Trim72Q1XH17 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim72Q1XH17 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim72Q1XH17 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms