Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.63■□□□□ 0.25
Col19a1Q0VF58 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col19a1Q0VF58 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col19a1Q0VF58 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col19a1Q0VF58 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Col19a1Q0VF58 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col19a1Q0VF58 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.62■□□□□ 0.25
Col19a1Q0VF58 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Col19a1Q0VF58 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col19a1Q0VF58 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col19a1Q0VF58 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC16.62■□□□□ 0.25
Col19a1Q0VF58 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col19a1Q0VF58 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC16.62■□□□□ 0.25
Col19a1Q0VF58 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC16.62■□□□□ 0.25
Col19a1Q0VF58 Gm25144-201ENSMUST00000179561 110 ntBASIC16.62■□□□□ 0.25
Col19a1Q0VF58 Gm25352-201ENSMUST00000179815 110 ntBASIC16.62■□□□□ 0.25
Col19a1Q0VF58 Gm27838-201ENSMUST00000184829 128 ntBASIC16.62■□□□□ 0.25
Col19a1Q0VF58 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.62■□□□□ 0.25
Col19a1Q0VF58 Gm45059-201ENSMUST00000205558 1077 ntBASIC16.62■□□□□ 0.25
Col19a1Q0VF58 Gm44719-201ENSMUST00000206404 149 ntBASIC16.62■□□□□ 0.25
Col19a1Q0VF58 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col19a1Q0VF58 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.62■□□□□ 0.25
Col19a1Q0VF58 Gm6180-201ENSMUST00000065243 498 ntBASIC16.62■□□□□ 0.25
Col19a1Q0VF58 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Col19a1Q0VF58 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col19a1Q0VF58 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col19a1Q0VF58 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col19a1Q0VF58 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Col19a1Q0VF58 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col19a1Q0VF58 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col19a1Q0VF58 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col19a1Q0VF58 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col19a1Q0VF58 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col19a1Q0VF58 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col19a1Q0VF58 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.61■□□□□ 0.25
Col19a1Q0VF58 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.61■□□□□ 0.25
Col19a1Q0VF58 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col19a1Q0VF58 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.61■□□□□ 0.25
Col19a1Q0VF58 Gm15321-201ENSMUST00000121290 288 ntBASIC16.61■□□□□ 0.25
Col19a1Q0VF58 Gm14767-201ENSMUST00000121559 586 ntBASIC16.61■□□□□ 0.25
Col19a1Q0VF58 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col19a1Q0VF58 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col19a1Q0VF58 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col19a1Q0VF58 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.61■□□□□ 0.25
Col19a1Q0VF58 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.61■□□□□ 0.25
Col19a1Q0VF58 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Col19a1Q0VF58 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col19a1Q0VF58 Gm45384-201ENSMUST00000210451 277 ntBASIC16.61■□□□□ 0.25
Col19a1Q0VF58 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col19a1Q0VF58 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col19a1Q0VF58 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col19a1Q0VF58 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col19a1Q0VF58 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.61■□□□□ 0.25
Col19a1Q0VF58 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Col19a1Q0VF58 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col19a1Q0VF58 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col19a1Q0VF58 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col19a1Q0VF58 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col19a1Q0VF58 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col19a1Q0VF58 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col19a1Q0VF58 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col19a1Q0VF58 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col19a1Q0VF58 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Col19a1Q0VF58 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col19a1Q0VF58 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col19a1Q0VF58 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col19a1Q0VF58 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Col19a1Q0VF58 Gm11543-201ENSMUST00000120758 370 ntBASIC16.6■□□□□ 0.25
Col19a1Q0VF58 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col19a1Q0VF58 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col19a1Q0VF58 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC16.6■□□□□ 0.25
Col19a1Q0VF58 Gm8602-201ENSMUST00000184045 607 ntBASIC16.6■□□□□ 0.25
Col19a1Q0VF58 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col19a1Q0VF58 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col19a1Q0VF58 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC16.6■□□□□ 0.25
Col19a1Q0VF58 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col19a1Q0VF58 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col19a1Q0VF58 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Col19a1Q0VF58 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col19a1Q0VF58 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Col19a1Q0VF58 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC16.6■□□□□ 0.25
Col19a1Q0VF58 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Col19a1Q0VF58 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col19a1Q0VF58 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col19a1Q0VF58 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.59■□□□□ 0.25
Col19a1Q0VF58 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col19a1Q0VF58 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col19a1Q0VF58 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col19a1Q0VF58 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col19a1Q0VF58 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col19a1Q0VF58 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col19a1Q0VF58 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col19a1Q0VF58 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col19a1Q0VF58 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Col19a1Q0VF58 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col19a1Q0VF58 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC16.59■□□□□ 0.25
Col19a1Q0VF58 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col19a1Q0VF58 Gm10499-201ENSMUST00000174094 934 ntBASIC16.59■□□□□ 0.25
Col19a1Q0VF58 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col19a1Q0VF58 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms