Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Gm17837-201ENSMUST00000186435 985 ntBASIC11.44□□□□□ -0.58
Hspg2Q05793 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hspg2Q05793 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.44□□□□□ -0.58
Hspg2Q05793 Gm9794-201ENSMUST00000202370 423 ntBASIC11.44□□□□□ -0.58
Hspg2Q05793 Gm18062-201ENSMUST00000208020 547 ntBASIC11.44□□□□□ -0.58
Hspg2Q05793 Gm18055-201ENSMUST00000208254 547 ntBASIC11.44□□□□□ -0.58
Hspg2Q05793 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hspg2Q05793 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hspg2Q05793 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hspg2Q05793 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC11.44□□□□□ -0.58
Hspg2Q05793 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hspg2Q05793 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hspg2Q05793 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hspg2Q05793 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hspg2Q05793 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC11.44□□□□□ -0.58
Hspg2Q05793 Gm11453-201ENSMUST00000117318 1007 ntBASIC11.44□□□□□ -0.58
Hspg2Q05793 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC11.44□□□□□ -0.58
Hspg2Q05793 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC11.44□□□□□ -0.58
Hspg2Q05793 Gm27430-201ENSMUST00000184585 107 ntBASIC11.44□□□□□ -0.58
Hspg2Q05793 Gm44333-201ENSMUST00000197168 107 ntBASIC11.44□□□□□ -0.58
Hspg2Q05793 Gm44855-201ENSMUST00000205725 362 ntBASIC11.44□□□□□ -0.58
Hspg2Q05793 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.44□□□□□ -0.58
Hspg2Q05793 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC11.44□□□□□ -0.58
Hspg2Q05793 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.44□□□□□ -0.58
Hspg2Q05793 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hspg2Q05793 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hspg2Q05793 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC11.44□□□□□ -0.58
Hspg2Q05793 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.44□□□□□ -0.58
Hspg2Q05793 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.44□□□□□ -0.58
Hspg2Q05793 Gm7730-201ENSMUST00000212486 454 ntBASIC11.44□□□□□ -0.58
Hspg2Q05793 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Hspg2Q05793 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.44□□□□□ -0.58
Hspg2Q05793 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
Hspg2Q05793 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hspg2Q05793 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hspg2Q05793 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hspg2Q05793 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hspg2Q05793 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC11.43□□□□□ -0.58
Hspg2Q05793 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hspg2Q05793 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Hspg2Q05793 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hspg2Q05793 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.43□□□□□ -0.58
Hspg2Q05793 Gm15321-201ENSMUST00000121290 288 ntBASIC11.43□□□□□ -0.58
Hspg2Q05793 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hspg2Q05793 Gm38294-201ENSMUST00000192831 381 ntBASIC11.43□□□□□ -0.58
Hspg2Q05793 Gm43433-201ENSMUST00000196573 481 ntBASIC11.43□□□□□ -0.58
Hspg2Q05793 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hspg2Q05793 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hspg2Q05793 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hspg2Q05793 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Hspg2Q05793 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC11.43□□□□□ -0.58
Hspg2Q05793 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Hspg2Q05793 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hspg2Q05793 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Hspg2Q05793 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hspg2Q05793 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hspg2Q05793 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hspg2Q05793 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hspg2Q05793 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC11.43□□□□□ -0.58
Hspg2Q05793 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hspg2Q05793 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.43□□□□□ -0.58
Hspg2Q05793 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hspg2Q05793 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hspg2Q05793 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hspg2Q05793 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hspg2Q05793 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hspg2Q05793 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hspg2Q05793 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hspg2Q05793 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Hspg2Q05793 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.43□□□□□ -0.58
Hspg2Q05793 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.43□□□□□ -0.58
Hspg2Q05793 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hspg2Q05793 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hspg2Q05793 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Hspg2Q05793 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hspg2Q05793 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hspg2Q05793 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hspg2Q05793 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Hspg2Q05793 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC11.42□□□□□ -0.58
Hspg2Q05793 Gm7774-201ENSMUST00000200064 533 ntBASIC11.42□□□□□ -0.58
Hspg2Q05793 Gm18057-201ENSMUST00000208220 503 ntBASIC11.42□□□□□ -0.58
Hspg2Q05793 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hspg2Q05793 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hspg2Q05793 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hspg2Q05793 Gm8096-201ENSMUST00000209921 1591 ntBASIC11.42□□□□□ -0.58
Hspg2Q05793 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hspg2Q05793 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hspg2Q05793 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hspg2Q05793 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Hspg2Q05793 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC11.42□□□□□ -0.58
Hspg2Q05793 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hspg2Q05793 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hspg2Q05793 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
Hspg2Q05793 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC11.42□□□□□ -0.58
Hspg2Q05793 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hspg2Q05793 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hspg2Q05793 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Hspg2Q05793 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Hspg2Q05793 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hspg2Q05793 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms