Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC19.54■□□□□ 0.72
Smarcc1P97496 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcc1P97496 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcc1P97496 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Smarcc1P97496 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcc1P97496 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcc1P97496 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcc1P97496 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcc1P97496 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcc1P97496 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Smarcc1P97496 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.53■□□□□ 0.72
Smarcc1P97496 Gm6018-201ENSMUST00000216090 1306 ntBASIC19.53■□□□□ 0.72
Smarcc1P97496 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcc1P97496 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcc1P97496 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Smarcc1P97496 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcc1P97496 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcc1P97496 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcc1P97496 Gm16198-201ENSMUST00000118766 670 ntBASIC19.53■□□□□ 0.72
Smarcc1P97496 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC19.53■□□□□ 0.72
Smarcc1P97496 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Smarcc1P97496 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcc1P97496 Gm10253-201ENSMUST00000194270 940 ntBASIC19.53■□□□□ 0.72
Smarcc1P97496 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC19.53■□□□□ 0.72
Smarcc1P97496 AC126408.1-201ENSMUST00000225184 523 ntBASIC19.53■□□□□ 0.72
Smarcc1P97496 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Smarcc1P97496 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcc1P97496 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcc1P97496 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcc1P97496 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcc1P97496 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcc1P97496 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcc1P97496 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcc1P97496 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC19.52■□□□□ 0.72
Smarcc1P97496 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcc1P97496 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Smarcc1P97496 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Smarcc1P97496 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcc1P97496 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Smarcc1P97496 Gm22065-201ENSMUST00000103753 110 ntBASIC19.52■□□□□ 0.72
Smarcc1P97496 Gm22066-201ENSMUST00000103761 110 ntBASIC19.52■□□□□ 0.72
Smarcc1P97496 Gm24932-201ENSMUST00000103763 110 ntBASIC19.52■□□□□ 0.72
Smarcc1P97496 Gm24115-201ENSMUST00000103799 110 ntBASIC19.52■□□□□ 0.72
Smarcc1P97496 Gm22190-201ENSMUST00000103827 110 ntBASIC19.52■□□□□ 0.72
Smarcc1P97496 Gm22191-201ENSMUST00000103831 110 ntBASIC19.52■□□□□ 0.72
Smarcc1P97496 Gm24721-201ENSMUST00000103849 110 ntBASIC19.52■□□□□ 0.72
Smarcc1P97496 Gm28018-201ENSMUST00000103869 110 ntBASIC19.52■□□□□ 0.72
Smarcc1P97496 Gm26399-201ENSMUST00000103937 110 ntBASIC19.52■□□□□ 0.72
Smarcc1P97496 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC19.52■□□□□ 0.72
Smarcc1P97496 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcc1P97496 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC19.52■□□□□ 0.72
Smarcc1P97496 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC19.52■□□□□ 0.72
Smarcc1P97496 Gm25349-201ENSMUST00000177728 110 ntBASIC19.52■□□□□ 0.72
Smarcc1P97496 Gm23616-201ENSMUST00000177797 110 ntBASIC19.52■□□□□ 0.72
Smarcc1P97496 Gm25871-201ENSMUST00000177816 110 ntBASIC19.52■□□□□ 0.72
Smarcc1P97496 Gm24752-201ENSMUST00000178240 110 ntBASIC19.52■□□□□ 0.72
Smarcc1P97496 Gm24496-201ENSMUST00000178287 110 ntBASIC19.52■□□□□ 0.72
Smarcc1P97496 Gm25649-201ENSMUST00000178476 110 ntBASIC19.52■□□□□ 0.72
Smarcc1P97496 Gm25548-201ENSMUST00000178681 110 ntBASIC19.52■□□□□ 0.72
Smarcc1P97496 Gm23147-201ENSMUST00000178841 110 ntBASIC19.52■□□□□ 0.72
Smarcc1P97496 Gm26095-201ENSMUST00000179270 110 ntBASIC19.52■□□□□ 0.72
Smarcc1P97496 Gm22171-201ENSMUST00000179283 110 ntBASIC19.52■□□□□ 0.72
Smarcc1P97496 Gm23936-201ENSMUST00000179354 110 ntBASIC19.52■□□□□ 0.72
Smarcc1P97496 Gm22619-201ENSMUST00000179516 110 ntBASIC19.52■□□□□ 0.72
Smarcc1P97496 Gm25255-201ENSMUST00000179579 110 ntBASIC19.52■□□□□ 0.72
Smarcc1P97496 Gm24755-201ENSMUST00000179691 110 ntBASIC19.52■□□□□ 0.72
Smarcc1P97496 Gm26506-201ENSMUST00000179692 110 ntBASIC19.52■□□□□ 0.72
Smarcc1P97496 Gm25086-201ENSMUST00000179931 110 ntBASIC19.52■□□□□ 0.72
Smarcc1P97496 Gm23243-201ENSMUST00000180047 110 ntBASIC19.52■□□□□ 0.72
Smarcc1P97496 Gm24659-201ENSMUST00000180212 110 ntBASIC19.52■□□□□ 0.72
Smarcc1P97496 Gm24169-201ENSMUST00000180244 110 ntBASIC19.52■□□□□ 0.72
Smarcc1P97496 Gm23689-201ENSMUST00000180354 110 ntBASIC19.52■□□□□ 0.72
Smarcc1P97496 Gm27359-201ENSMUST00000184153 110 ntBASIC19.52■□□□□ 0.72
Smarcc1P97496 Gm27785-201ENSMUST00000184268 110 ntBASIC19.52■□□□□ 0.72
Smarcc1P97496 Gm27466-201ENSMUST00000184396 110 ntBASIC19.52■□□□□ 0.72
Smarcc1P97496 Gm27703-201ENSMUST00000184836 110 ntBASIC19.52■□□□□ 0.72
Smarcc1P97496 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcc1P97496 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC19.52■□□□□ 0.72
Smarcc1P97496 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcc1P97496 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smarcc1P97496 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smarcc1P97496 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smarcc1P97496 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smarcc1P97496 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smarcc1P97496 AC154767.3-201ENSMUST00000225150 1342 ntBASIC19.51■□□□□ 0.71
Smarcc1P97496 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcc1P97496 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcc1P97496 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcc1P97496 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcc1P97496 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcc1P97496 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcc1P97496 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Smarcc1P97496 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Smarcc1P97496 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcc1P97496 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Smarcc1P97496 Gm7286-201ENSMUST00000182691 1007 ntBASIC19.51■□□□□ 0.71
Smarcc1P97496 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcc1P97496 Gm18057-201ENSMUST00000208220 503 ntBASIC19.51■□□□□ 0.71
Smarcc1P97496 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcc1P97496 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms