Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx2-3P97334 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx2-3P97334 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx2-3P97334 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx2-3P97334 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Nkx2-3P97334 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.62■□□□□ 0.73
Nkx2-3P97334 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx2-3P97334 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx2-3P97334 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Nkx2-3P97334 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Nkx2-3P97334 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
Nkx2-3P97334 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx2-3P97334 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC19.61■□□□□ 0.73
Nkx2-3P97334 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx2-3P97334 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx2-3P97334 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx2-3P97334 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Nkx2-3P97334 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Nkx2-3P97334 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx2-3P97334 AC131187.1-201ENSMUST00000224567 809 ntBASIC19.61■□□□□ 0.73
Nkx2-3P97334 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx2-3P97334 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.61■□□□□ 0.73
Nkx2-3P97334 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC19.61■□□□□ 0.73
Nkx2-3P97334 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx2-3P97334 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx2-3P97334 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx2-3P97334 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Nkx2-3P97334 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx2-3P97334 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx2-3P97334 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx2-3P97334 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC19.6■□□□□ 0.73
Nkx2-3P97334 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx2-3P97334 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx2-3P97334 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Nkx2-3P97334 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx2-3P97334 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC19.6■□□□□ 0.73
Nkx2-3P97334 Gm20949-201ENSMUST00000206478 952 ntBASIC19.6■□□□□ 0.73
Nkx2-3P97334 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC19.6■□□□□ 0.73
Nkx2-3P97334 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC19.6■□□□□ 0.73
Nkx2-3P97334 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC19.6■□□□□ 0.73
Nkx2-3P97334 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx2-3P97334 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx2-3P97334 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx2-3P97334 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx2-3P97334 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Nkx2-3P97334 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx2-3P97334 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx2-3P97334 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx2-3P97334 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx2-3P97334 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Nkx2-3P97334 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx2-3P97334 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx2-3P97334 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx2-3P97334 Gm6018-201ENSMUST00000216090 1306 ntBASIC19.59■□□□□ 0.73
Nkx2-3P97334 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx2-3P97334 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx2-3P97334 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC19.59■□□□□ 0.73
Nkx2-3P97334 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx2-3P97334 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC19.59■□□□□ 0.73
Nkx2-3P97334 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC19.59■□□□□ 0.73
Nkx2-3P97334 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx2-3P97334 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.59■□□□□ 0.73
Nkx2-3P97334 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC19.59■□□□□ 0.73
Nkx2-3P97334 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx2-3P97334 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx2-3P97334 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx2-3P97334 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx2-3P97334 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.59■□□□□ 0.73
Nkx2-3P97334 Gm13127-201ENSMUST00000118978 1389 ntBASIC19.58■□□□□ 0.73
Nkx2-3P97334 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Nkx2-3P97334 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nkx2-3P97334 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Nkx2-3P97334 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nkx2-3P97334 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
Nkx2-3P97334 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nkx2-3P97334 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nkx2-3P97334 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nkx2-3P97334 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC19.58■□□□□ 0.72
Nkx2-3P97334 CT030684.1-201ENSMUST00000227292 914 ntBASIC19.58■□□□□ 0.72
Nkx2-3P97334 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nkx2-3P97334 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Nkx2-3P97334 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nkx2-3P97334 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nkx2-3P97334 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Nkx2-3P97334 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nkx2-3P97334 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nkx2-3P97334 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nkx2-3P97334 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nkx2-3P97334 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Nkx2-3P97334 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Nkx2-3P97334 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Nkx2-3P97334 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx2-3P97334 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx2-3P97334 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx2-3P97334 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx2-3P97334 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx2-3P97334 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx2-3P97334 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx2-3P97334 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx2-3P97334 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms