Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
PrkdcP97313 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
PrkdcP97313 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC10.6□□□□□ -0.71
PrkdcP97313 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
PrkdcP97313 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
PrkdcP97313 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
PrkdcP97313 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
PrkdcP97313 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.59□□□□□ -0.71
PrkdcP97313 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
PrkdcP97313 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
PrkdcP97313 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
PrkdcP97313 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
PrkdcP97313 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC10.59□□□□□ -0.71
PrkdcP97313 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
PrkdcP97313 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC10.59□□□□□ -0.71
PrkdcP97313 Gm7669-201ENSMUST00000210184 1603 ntBASIC10.59□□□□□ -0.71
PrkdcP97313 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
PrkdcP97313 AC155252.1-201ENSMUST00000226462 1208 ntBASIC10.59□□□□□ -0.71
PrkdcP97313 Gm20445-201ENSMUST00000061905 565 ntBASIC10.59□□□□□ -0.71
PrkdcP97313 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
PrkdcP97313 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
PrkdcP97313 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
PrkdcP97313 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
PrkdcP97313 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC10.59□□□□□ -0.71
PrkdcP97313 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
PrkdcP97313 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
PrkdcP97313 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
PrkdcP97313 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC10.58□□□□□ -0.71
PrkdcP97313 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.71
PrkdcP97313 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.71
PrkdcP97313 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
PrkdcP97313 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC10.58□□□□□ -0.72
PrkdcP97313 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
PrkdcP97313 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
PrkdcP97313 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC10.58□□□□□ -0.72
PrkdcP97313 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC10.58□□□□□ -0.72
PrkdcP97313 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
PrkdcP97313 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
PrkdcP97313 Haglr-201ENSMUST00000100000 2085 ntBASIC10.58□□□□□ -0.72
PrkdcP97313 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC10.58□□□□□ -0.72
PrkdcP97313 Gm5320-201ENSMUST00000207163 1519 ntBASIC10.58□□□□□ -0.72
PrkdcP97313 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC10.58□□□□□ -0.72
PrkdcP97313 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
PrkdcP97313 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
PrkdcP97313 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
PrkdcP97313 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
PrkdcP97313 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
PrkdcP97313 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
PrkdcP97313 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
PrkdcP97313 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
PrkdcP97313 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
PrkdcP97313 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
PrkdcP97313 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
PrkdcP97313 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
PrkdcP97313 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
PrkdcP97313 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
PrkdcP97313 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC10.58□□□□□ -0.72
PrkdcP97313 Rn7s1-201ENSMUST00000174924 300 ntBASIC10.58□□□□□ -0.72
PrkdcP97313 Rn7s2-201ENSMUST00000175032 300 ntBASIC10.58□□□□□ -0.72
PrkdcP97313 Gm26461-201ENSMUST00000175064 290 ntBASIC10.58□□□□□ -0.72
PrkdcP97313 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC10.58□□□□□ -0.72
PrkdcP97313 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
PrkdcP97313 Gm45841-201ENSMUST00000207700 164 ntBASIC10.58□□□□□ -0.72
PrkdcP97313 Gm5035-201ENSMUST00000215581 927 ntBASIC10.58□□□□□ -0.72
PrkdcP97313 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
PrkdcP97313 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
PrkdcP97313 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
PrkdcP97313 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
PrkdcP97313 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
PrkdcP97313 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
PrkdcP97313 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
PrkdcP97313 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
PrkdcP97313 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
PrkdcP97313 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC10.57□□□□□ -0.72
PrkdcP97313 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
PrkdcP97313 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
PrkdcP97313 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
PrkdcP97313 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
PrkdcP97313 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC10.57□□□□□ -0.72
PrkdcP97313 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
PrkdcP97313 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC10.57□□□□□ -0.72
PrkdcP97313 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
PrkdcP97313 Gm6257-201ENSMUST00000163864 910 ntBASIC10.57□□□□□ -0.72
PrkdcP97313 CT030657.3-201ENSMUST00000222707 1200 ntBASIC10.57□□□□□ -0.72
PrkdcP97313 AC238811.3-201ENSMUST00000225422 709 ntBASIC10.57□□□□□ -0.72
PrkdcP97313 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
PrkdcP97313 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC10.57□□□□□ -0.72
PrkdcP97313 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
PrkdcP97313 Gm13392-201ENSMUST00000117708 150 ntBASIC10.57□□□□□ -0.72
PrkdcP97313 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
PrkdcP97313 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC10.57□□□□□ -0.72
PrkdcP97313 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
PrkdcP97313 Gm45784-201ENSMUST00000188360 142 ntBASIC10.57□□□□□ -0.72
PrkdcP97313 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
PrkdcP97313 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
PrkdcP97313 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC10.57□□□□□ -0.72
PrkdcP97313 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
PrkdcP97313 Gm5898-201ENSMUST00000121016 2071 ntBASIC10.57□□□□□ -0.72
PrkdcP97313 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
PrkdcP97313 Gm12960-201ENSMUST00000120017 1066 ntBASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms