Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.96□□□□□ -0.17
SgcbP82349 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.96□□□□□ -0.17
SgcbP82349 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SgcbP82349 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
SgcbP82349 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SgcbP82349 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SgcbP82349 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SgcbP82349 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
SgcbP82349 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SgcbP82349 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
SgcbP82349 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SgcbP82349 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.95□□□□□ -0.18
SgcbP82349 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SgcbP82349 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
SgcbP82349 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SgcbP82349 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SgcbP82349 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SgcbP82349 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SgcbP82349 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SgcbP82349 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SgcbP82349 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SgcbP82349 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.95□□□□□ -0.18
SgcbP82349 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SgcbP82349 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SgcbP82349 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.95□□□□□ -0.18
SgcbP82349 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SgcbP82349 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SgcbP82349 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SgcbP82349 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.95□□□□□ -0.18
SgcbP82349 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SgcbP82349 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SgcbP82349 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.95□□□□□ -0.18
SgcbP82349 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.95□□□□□ -0.18
SgcbP82349 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SgcbP82349 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SgcbP82349 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SgcbP82349 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SgcbP82349 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SgcbP82349 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SgcbP82349 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SgcbP82349 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SgcbP82349 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SgcbP82349 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SgcbP82349 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.95□□□□□ -0.18
SgcbP82349 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SgcbP82349 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SgcbP82349 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SgcbP82349 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SgcbP82349 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
SgcbP82349 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SgcbP82349 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SgcbP82349 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.94□□□□□ -0.18
SgcbP82349 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SgcbP82349 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SgcbP82349 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SgcbP82349 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SgcbP82349 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SgcbP82349 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.94□□□□□ -0.18
SgcbP82349 Gm13418-201ENSMUST00000119097 944 ntBASIC13.94□□□□□ -0.18
SgcbP82349 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
SgcbP82349 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SgcbP82349 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SgcbP82349 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SgcbP82349 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SgcbP82349 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.94□□□□□ -0.18
SgcbP82349 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.94□□□□□ -0.18
SgcbP82349 AC154532.1-201ENSMUST00000227860 965 ntBASIC13.94□□□□□ -0.18
SgcbP82349 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SgcbP82349 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SgcbP82349 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
SgcbP82349 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SgcbP82349 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SgcbP82349 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SgcbP82349 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SgcbP82349 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SgcbP82349 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SgcbP82349 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.94□□□□□ -0.18
SgcbP82349 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SgcbP82349 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SgcbP82349 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.94□□□□□ -0.18
SgcbP82349 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SgcbP82349 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SgcbP82349 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.94□□□□□ -0.18
SgcbP82349 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SgcbP82349 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SgcbP82349 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
SgcbP82349 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SgcbP82349 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SgcbP82349 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SgcbP82349 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SgcbP82349 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SgcbP82349 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SgcbP82349 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SgcbP82349 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SgcbP82349 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
SgcbP82349 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SgcbP82349 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SgcbP82349 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SgcbP82349 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SgcbP82349 Gm7862-201ENSMUST00000121461 292 ntBASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms