Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CiitaP79621 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.96■□□□□ 0.31
CiitaP79621 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.96■□□□□ 0.31
CiitaP79621 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.96■□□□□ 0.31
CiitaP79621 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
CiitaP79621 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CiitaP79621 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CiitaP79621 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CiitaP79621 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CiitaP79621 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CiitaP79621 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CiitaP79621 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CiitaP79621 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.95■□□□□ 0.3
CiitaP79621 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CiitaP79621 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CiitaP79621 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CiitaP79621 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.95■□□□□ 0.3
CiitaP79621 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CiitaP79621 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CiitaP79621 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CiitaP79621 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
CiitaP79621 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.95■□□□□ 0.3
CiitaP79621 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CiitaP79621 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
CiitaP79621 Gm8000-201ENSMUST00000188378 592 ntBASIC16.95■□□□□ 0.3
CiitaP79621 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.95■□□□□ 0.3
CiitaP79621 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.95■□□□□ 0.3
CiitaP79621 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CiitaP79621 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CiitaP79621 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CiitaP79621 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CiitaP79621 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CiitaP79621 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CiitaP79621 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CiitaP79621 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.94■□□□□ 0.3
CiitaP79621 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.94■□□□□ 0.3
CiitaP79621 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CiitaP79621 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CiitaP79621 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CiitaP79621 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CiitaP79621 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.94■□□□□ 0.3
CiitaP79621 Gm15467-201ENSMUST00000120582 445 ntBASIC16.94■□□□□ 0.3
CiitaP79621 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.94■□□□□ 0.3
CiitaP79621 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CiitaP79621 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CiitaP79621 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.94■□□□□ 0.3
CiitaP79621 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CiitaP79621 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.94■□□□□ 0.3
CiitaP79621 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.94■□□□□ 0.3
CiitaP79621 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CiitaP79621 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CiitaP79621 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CiitaP79621 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CiitaP79621 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CiitaP79621 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CiitaP79621 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CiitaP79621 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CiitaP79621 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.94■□□□□ 0.3
CiitaP79621 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CiitaP79621 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CiitaP79621 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CiitaP79621 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CiitaP79621 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CiitaP79621 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CiitaP79621 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CiitaP79621 Gm14722-201ENSMUST00000118943 689 ntBASIC16.93■□□□□ 0.3
CiitaP79621 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
CiitaP79621 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.93■□□□□ 0.3
CiitaP79621 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.93■□□□□ 0.3
CiitaP79621 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CiitaP79621 Gm27300-201ENSMUST00000184085 97 ntBASIC16.93■□□□□ 0.3
CiitaP79621 Gm27335-201ENSMUST00000184758 97 ntBASIC16.93■□□□□ 0.3
CiitaP79621 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.93■□□□□ 0.3
CiitaP79621 Gm5264-201ENSMUST00000190584 848 ntBASIC16.93■□□□□ 0.3
CiitaP79621 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CiitaP79621 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CiitaP79621 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CiitaP79621 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CiitaP79621 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CiitaP79621 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CiitaP79621 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CiitaP79621 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CiitaP79621 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CiitaP79621 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CiitaP79621 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CiitaP79621 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CiitaP79621 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CiitaP79621 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CiitaP79621 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.93■□□□□ 0.3
CiitaP79621 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
CiitaP79621 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.93■□□□□ 0.3
CiitaP79621 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CiitaP79621 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.92■□□□□ 0.3
CiitaP79621 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CiitaP79621 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CiitaP79621 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CiitaP79621 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CiitaP79621 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CiitaP79621 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CiitaP79621 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms