Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC25.41■■□□□ 1.66
Cux2P70298 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Cux2P70298 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Cux2P70298 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Cux2P70298 Mir1938-201ENSMUST00000158746 100 ntBASIC25.41■■□□□ 1.66
Cux2P70298 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC25.41■■□□□ 1.66
Cux2P70298 Klk2-ps-201ENSMUST00000205342 571 ntBASIC25.41■■□□□ 1.66
Cux2P70298 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC25.41■■□□□ 1.66
Cux2P70298 AC238811.1-201ENSMUST00000225302 441 ntBASIC25.41■■□□□ 1.66
Cux2P70298 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Cux2P70298 Gm13233-201ENSMUST00000118760 1443 ntBASIC25.41■■□□□ 1.66
Cux2P70298 Gm13244-201ENSMUST00000118855 1446 ntBASIC25.41■■□□□ 1.66
Cux2P70298 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Cux2P70298 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Cux2P70298 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Cux2P70298 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Cux2P70298 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Cux2P70298 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Cux2P70298 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Cux2P70298 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC25.4■■□□□ 1.66
Cux2P70298 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC25.4■■□□□ 1.66
Cux2P70298 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
Cux2P70298 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Cux2P70298 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC25.4■■□□□ 1.66
Cux2P70298 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
Cux2P70298 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Cux2P70298 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
Cux2P70298 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Cux2P70298 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC25.4■■□□□ 1.66
Cux2P70298 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC25.39■■□□□ 1.66
Cux2P70298 Gm13829-201ENSMUST00000119600 138 ntBASIC25.39■■□□□ 1.66
Cux2P70298 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC25.39■■□□□ 1.66
Cux2P70298 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Cux2P70298 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Cux2P70298 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Cux2P70298 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Cux2P70298 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Cux2P70298 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Cux2P70298 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
Cux2P70298 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Cux2P70298 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Cux2P70298 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Cux2P70298 Gm7669-201ENSMUST00000210184 1603 ntBASIC25.39■■□□□ 1.65
Cux2P70298 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Cux2P70298 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Cux2P70298 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Cux2P70298 Gm9908-201ENSMUST00000211534 448 ntBASIC25.38■■□□□ 1.65
Cux2P70298 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC25.38■■□□□ 1.65
Cux2P70298 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC25.38■■□□□ 1.65
Cux2P70298 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Cux2P70298 Gm42466-201ENSMUST00000202099 1301 ntBASIC25.38■■□□□ 1.65
Cux2P70298 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
Cux2P70298 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC25.38■■□□□ 1.65
Cux2P70298 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
Cux2P70298 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
Cux2P70298 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Cux2P70298 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC25.37■■□□□ 1.65
Cux2P70298 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC25.37■■□□□ 1.65
Cux2P70298 Ighv8-7-201ENSMUST00000194349 297 ntBASIC25.37■■□□□ 1.65
Cux2P70298 Gm18018-201ENSMUST00000198273 408 ntBASIC25.37■■□□□ 1.65
Cux2P70298 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Cux2P70298 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Cux2P70298 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
Cux2P70298 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
Cux2P70298 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC25.37■■□□□ 1.65
Cux2P70298 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Cux2P70298 Mir6420-201ENSMUST00000185032 102 ntBASIC25.37■■□□□ 1.65
Cux2P70298 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Cux2P70298 AC158529.1-201ENSMUST00000223618 239 ntBASIC25.37■■□□□ 1.65
Cux2P70298 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Cux2P70298 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Cux2P70298 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Cux2P70298 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Cux2P70298 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
Cux2P70298 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Cux2P70298 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Cux2P70298 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Cux2P70298 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
Cux2P70298 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Cux2P70298 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
Cux2P70298 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
Cux2P70298 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC25.36■■□□□ 1.65
Cux2P70298 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC25.36■■□□□ 1.65
Cux2P70298 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
Cux2P70298 Gm43630-201ENSMUST00000201550 776 ntBASIC25.36■■□□□ 1.65
Cux2P70298 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Cux2P70298 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Cux2P70298 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
Cux2P70298 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Cux2P70298 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC25.35■■□□□ 1.65
Cux2P70298 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
Cux2P70298 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Cux2P70298 Gm5898-201ENSMUST00000121016 2071 ntBASIC25.35■■□□□ 1.65
Cux2P70298 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Cux2P70298 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Cux2P70298 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Cux2P70298 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
Cux2P70298 Gm24543-201ENSMUST00000103867 82 ntBASIC25.35■■□□□ 1.65
Cux2P70298 Gm4204-201ENSMUST00000110798 1231 ntBASIC25.35■■□□□ 1.65
Cux2P70298 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms