Protein–RNA interactions for Protein: P62984

Uba52, Ubiquitin-60S ribosomal protein L40, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba52P62984 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Uba52P62984 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Uba52P62984 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.64□□□□□ -0.23
Uba52P62984 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Uba52P62984 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Uba52P62984 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Uba52P62984 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Uba52P62984 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Uba52P62984 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Uba52P62984 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Uba52P62984 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Uba52P62984 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Uba52P62984 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Uba52P62984 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.64□□□□□ -0.23
Uba52P62984 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Uba52P62984 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Uba52P62984 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Uba52P62984 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Uba52P62984 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Uba52P62984 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Uba52P62984 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Uba52P62984 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Uba52P62984 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Uba52P62984 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Uba52P62984 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Uba52P62984 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Uba52P62984 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Uba52P62984 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Uba52P62984 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Uba52P62984 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Uba52P62984 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Uba52P62984 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Uba52P62984 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Uba52P62984 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Uba52P62984 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Uba52P62984 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Uba52P62984 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Uba52P62984 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Uba52P62984 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Uba52P62984 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Uba52P62984 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Uba52P62984 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Uba52P62984 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.63□□□□□ -0.23
Uba52P62984 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.63□□□□□ -0.23
Uba52P62984 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Uba52P62984 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Uba52P62984 Gm11950-201ENSMUST00000121615 838 ntBASIC13.63□□□□□ -0.23
Uba52P62984 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Uba52P62984 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Uba52P62984 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Uba52P62984 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Uba52P62984 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Uba52P62984 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.63□□□□□ -0.23
Uba52P62984 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Uba52P62984 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Uba52P62984 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Uba52P62984 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Uba52P62984 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Uba52P62984 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Uba52P62984 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Uba52P62984 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Uba52P62984 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Uba52P62984 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Uba52P62984 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.62□□□□□ -0.23
Uba52P62984 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Uba52P62984 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.62□□□□□ -0.23
Uba52P62984 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.62□□□□□ -0.23
Uba52P62984 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Uba52P62984 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Uba52P62984 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Uba52P62984 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Uba52P62984 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Uba52P62984 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Uba52P62984 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Uba52P62984 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Uba52P62984 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13.62□□□□□ -0.23
Uba52P62984 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Uba52P62984 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Uba52P62984 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.62□□□□□ -0.23
Uba52P62984 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Uba52P62984 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Uba52P62984 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Uba52P62984 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Uba52P62984 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Uba52P62984 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Uba52P62984 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Uba52P62984 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Uba52P62984 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Uba52P62984 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.62□□□□□ -0.23
Uba52P62984 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Uba52P62984 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Uba52P62984 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Uba52P62984 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Uba52P62984 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.61□□□□□ -0.23
Uba52P62984 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Uba52P62984 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Uba52P62984 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Uba52P62984 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Uba52P62984 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Uba52P62984 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms