Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ybx1P62960 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ybx1P62960 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ybx1P62960 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ybx1P62960 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ybx1P62960 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ybx1P62960 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ybx1P62960 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ybx1P62960 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ybx1P62960 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ybx1P62960 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ybx1P62960 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ybx1P62960 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ybx1P62960 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.03■□□□□ 0.16
Ybx1P62960 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.03■□□□□ 0.16
Ybx1P62960 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ybx1P62960 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ybx1P62960 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ybx1P62960 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.03■□□□□ 0.16
Ybx1P62960 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.03■□□□□ 0.16
Ybx1P62960 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ybx1P62960 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ybx1P62960 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Ybx1P62960 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ybx1P62960 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ybx1P62960 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ybx1P62960 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
Ybx1P62960 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ybx1P62960 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ybx1P62960 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.02■□□□□ 0.16
Ybx1P62960 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.02■□□□□ 0.16
Ybx1P62960 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.02■□□□□ 0.16
Ybx1P62960 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.02■□□□□ 0.16
Ybx1P62960 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ybx1P62960 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ybx1P62960 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ybx1P62960 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ybx1P62960 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ybx1P62960 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ybx1P62960 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ybx1P62960 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ybx1P62960 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ybx1P62960 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ybx1P62960 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ybx1P62960 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ybx1P62960 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Ybx1P62960 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.01■□□□□ 0.15
Ybx1P62960 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ybx1P62960 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ybx1P62960 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Ybx1P62960 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Ybx1P62960 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ybx1P62960 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Ybx1P62960 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ybx1P62960 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ybx1P62960 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.01■□□□□ 0.15
Ybx1P62960 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ybx1P62960 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ybx1P62960 Gm19164-201ENSMUST00000210667 640 ntBASIC16.01■□□□□ 0.15
Ybx1P62960 Gm7787-201ENSMUST00000216858 688 ntBASIC16.01■□□□□ 0.15
Ybx1P62960 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.01■□□□□ 0.15
Ybx1P62960 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ybx1P62960 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ybx1P62960 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ybx1P62960 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ybx1P62960 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ybx1P62960 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.01■□□□□ 0.15
Ybx1P62960 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ybx1P62960 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ybx1P62960 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ybx1P62960 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.01■□□□□ 0.15
Ybx1P62960 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ybx1P62960 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ybx1P62960 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Ybx1P62960 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ybx1P62960 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Ybx1P62960 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ybx1P62960 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
Ybx1P62960 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ybx1P62960 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Ybx1P62960 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16■□□□□ 0.15
Ybx1P62960 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ybx1P62960 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ybx1P62960 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16■□□□□ 0.15
Ybx1P62960 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16■□□□□ 0.15
Ybx1P62960 Gm6257-201ENSMUST00000163864 910 ntBASIC16■□□□□ 0.15
Ybx1P62960 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ybx1P62960 Gm18489-201ENSMUST00000172565 551 ntBASIC16■□□□□ 0.15
Ybx1P62960 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16■□□□□ 0.15
Ybx1P62960 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ybx1P62960 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Ybx1P62960 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ybx1P62960 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
Ybx1P62960 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ybx1P62960 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
Ybx1P62960 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ybx1P62960 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ybx1P62960 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ybx1P62960 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ybx1P62960 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms