Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gabra1P62812 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gabra1P62812 Gm12085-201ENSMUST00000119263 940 ntBASIC13.24□□□□□ -0.29
Gabra1P62812 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gabra1P62812 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Gabra1P62812 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Gabra1P62812 Gm38027-201ENSMUST00000192315 235 ntBASIC13.24□□□□□ -0.29
Gabra1P62812 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Gabra1P62812 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Gabra1P62812 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Gabra1P62812 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Gabra1P62812 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gabra1P62812 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gabra1P62812 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gabra1P62812 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.24□□□□□ -0.29
Gabra1P62812 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Gabra1P62812 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Gabra1P62812 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.23□□□□□ -0.29
Gabra1P62812 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.23□□□□□ -0.29
Gabra1P62812 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gabra1P62812 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Gabra1P62812 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gabra1P62812 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gabra1P62812 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gabra1P62812 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.23□□□□□ -0.29
Gabra1P62812 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gabra1P62812 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gabra1P62812 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gabra1P62812 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gabra1P62812 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gabra1P62812 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Gabra1P62812 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gabra1P62812 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC13.23□□□□□ -0.29
Gabra1P62812 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gabra1P62812 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gabra1P62812 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gabra1P62812 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gabra1P62812 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gabra1P62812 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gabra1P62812 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Gabra1P62812 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gabra1P62812 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gabra1P62812 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Gabra1P62812 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gabra1P62812 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gabra1P62812 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Gabra1P62812 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gabra1P62812 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gabra1P62812 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Gabra1P62812 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gabra1P62812 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Gabra1P62812 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gabra1P62812 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.22□□□□□ -0.29
Gabra1P62812 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gabra1P62812 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gabra1P62812 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gabra1P62812 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gabra1P62812 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gabra1P62812 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gabra1P62812 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gabra1P62812 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gabra1P62812 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Gabra1P62812 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gabra1P62812 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Gabra1P62812 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gabra1P62812 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gabra1P62812 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gabra1P62812 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gabra1P62812 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gabra1P62812 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gabra1P62812 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gabra1P62812 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gabra1P62812 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gabra1P62812 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gabra1P62812 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gabra1P62812 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gabra1P62812 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gabra1P62812 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Gabra1P62812 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gabra1P62812 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Gabra1P62812 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gabra1P62812 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gabra1P62812 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Gabra1P62812 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.21□□□□□ -0.29
Gabra1P62812 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gabra1P62812 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.29
Gabra1P62812 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Gabra1P62812 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.21□□□□□ -0.29
Gabra1P62812 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13.21□□□□□ -0.29
Gabra1P62812 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC13.21□□□□□ -0.29
Gabra1P62812 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gabra1P62812 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gabra1P62812 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gabra1P62812 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.21□□□□□ -0.29
Gabra1P62812 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Gabra1P62812 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Gabra1P62812 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.21□□□□□ -0.3
Gabra1P62812 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gabra1P62812 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gabra1P62812 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms