Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Lrch1P62046 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lrch1P62046 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lrch1P62046 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lrch1P62046 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lrch1P62046 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Lrch1P62046 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lrch1P62046 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lrch1P62046 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lrch1P62046 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lrch1P62046 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lrch1P62046 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Lrch1P62046 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lrch1P62046 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Lrch1P62046 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lrch1P62046 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Lrch1P62046 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lrch1P62046 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lrch1P62046 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC18.4■□□□□ 0.54
Lrch1P62046 Mir7684-201ENSMUST00000183858 60 ntBASIC18.4■□□□□ 0.54
Lrch1P62046 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC18.4■□□□□ 0.54
Lrch1P62046 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC18.4■□□□□ 0.54
Lrch1P62046 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Lrch1P62046 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC18.4■□□□□ 0.54
Lrch1P62046 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC18.4■□□□□ 0.54
Lrch1P62046 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lrch1P62046 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Lrch1P62046 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lrch1P62046 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Lrch1P62046 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lrch1P62046 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.4■□□□□ 0.54
Lrch1P62046 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.39■□□□□ 0.53
Lrch1P62046 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lrch1P62046 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Lrch1P62046 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC18.39■□□□□ 0.53
Lrch1P62046 Gm27989-201ENSMUST00000184721 107 ntBASIC18.39■□□□□ 0.53
Lrch1P62046 Gtpbp10-211ENSMUST00000198799 648 ntBASIC18.39■□□□□ 0.53
Lrch1P62046 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lrch1P62046 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lrch1P62046 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lrch1P62046 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lrch1P62046 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lrch1P62046 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lrch1P62046 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lrch1P62046 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lrch1P62046 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Lrch1P62046 Grk6-207ENSMUST00000225925 2769 ntBASIC18.39■□□□□ 0.53
Lrch1P62046 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lrch1P62046 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lrch1P62046 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Lrch1P62046 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lrch1P62046 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lrch1P62046 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Lrch1P62046 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lrch1P62046 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lrch1P62046 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Lrch1P62046 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC18.38■□□□□ 0.53
Lrch1P62046 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Lrch1P62046 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC18.38■□□□□ 0.53
Lrch1P62046 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lrch1P62046 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lrch1P62046 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lrch1P62046 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lrch1P62046 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lrch1P62046 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Lrch1P62046 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lrch1P62046 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lrch1P62046 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lrch1P62046 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
Lrch1P62046 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrch1P62046 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrch1P62046 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.37■□□□□ 0.53
Lrch1P62046 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrch1P62046 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrch1P62046 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.37■□□□□ 0.53
Lrch1P62046 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Lrch1P62046 Gm6415-201ENSMUST00000118488 348 ntBASIC18.37■□□□□ 0.53
Lrch1P62046 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC18.37■□□□□ 0.53
Lrch1P62046 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC18.37■□□□□ 0.53
Lrch1P62046 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lrch1P62046 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.37■□□□□ 0.53
Lrch1P62046 AC166341.4-201ENSMUST00000220625 123 ntBASIC18.37■□□□□ 0.53
Lrch1P62046 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrch1P62046 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC18.37■□□□□ 0.53
Lrch1P62046 Gm10154-201ENSMUST00000084445 354 ntBASIC18.37■□□□□ 0.53
Lrch1P62046 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Lrch1P62046 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrch1P62046 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrch1P62046 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrch1P62046 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lrch1P62046 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrch1P62046 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.37■□□□□ 0.53
Lrch1P62046 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Lrch1P62046 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Lrch1P62046 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrch1P62046 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrch1P62046 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrch1P62046 Gm14127-201ENSMUST00000117906 678 ntBASIC18.36■□□□□ 0.53
Lrch1P62046 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC18.36■□□□□ 0.53
Lrch1P62046 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms